Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01578 ATGGTAAAAGTTCAGAAGAGGCCAGTAAAGTATAAGCAGAAAAGGGCCCGTCAGCTGGGATACAATTCAATTCAACGTTCAAAGGTCAAAAACCATTTCCGATTGGAATTTTCATTTATTCGCACACTCCCCAACTACCGGATGGTCAGAGTCACGTTTTTTTCATTCTTCCCTCCATCCCTCTCCCTCACAATGGCGAAAAACCCGTTACTCTGCTCGATCGTCCTCCTCGCCGTGCTCGCCGGAGCCACCTCAGACGACGGCGCCGAGCTCGACTACTCGAAGCTCTCCGGCATTATAATCCCCGGCTTCGCGTCCACTCAGCTCCGAGCATGGTCCATTCTCGACTGTCCTTACTCTCCGCTCGATTTCAACCCTCTCGACTTGGTCTGGCTCGACACAACCAAACTTCTTTCTGCTGTCAATTGCTGGCTTAAGTGCATGGTGTTGGATCCTTACAACCAGACAGATCATCCTGATTGCAAGTCCCGTCCGGATAGTGGTCTTTCTGGCATTACAGAACTTGATCCAGGTTATATAACAGGACCTCTTTCATCAGTTTGGAAAGAATGGATTAAGTGGTGTATTGAATTTGGCATAGAAGCTAATGCAATAATTGCTGTTCCGTATGATTGGAGATTGTCGCCCTCCAAGCTTGAAGAGCGGGACCTTTACTTTCATAAGCTAAAAATAACATTTGAAACTGCTTACAAACTTCGTGGTGGCCCCTCTTTAGTTTTTGCCCATTCATTGGGTAATCATGTTTTCCGTTATTTCTTGGAGTGGTTGAAGCTAGAGATTGCACCAAAACATTATATCCAGTGGCTGGATCAACATATTCATGCCTATTTTGCTGTTGGAGCTCCCCTTCTTGGTGCAATGGAAACCATTGAAGCAACACTTACTGGATTCACATTTGGTCTTCCTATATCTGAGGGAACAGCTCGGATGATGTTCAACTCCTTTGGTTCATCATTATGGATGATGCCTTTTTCCAAGTACTGTAGAACAGATAATAAATATTGGAAGCATTTTTCTGGGGGAAGGCAAGTGGGTCCACCAACATATCACTGTGATGAGCAGGAGTTTAAGACAAACTTATCTGGGTGGCCAACAAAAATAATCAACATTGAAATTCCCTCAACTCGTGCATTTGATGCATATCCTTCATTCTCAGAAATACCTGAGGCCAACTTGTCCAGCATGGAGTGCGGACTACCTACTCAATTATCTTTCTCAGCTCGGGAAATATCAGATGGCACCTTTTTCAAGGCAATTGAAGATTATGACCCAGACAGCAAGAGGCTCTTGTACCTGTTAGAGAAATCATATCTTGGCGATCCTGTTCTTAATCCCCTTACACCTTGGGACCGGCCACCAATAAAAAATGTATTCTGCATTTATGGGACTGATTCAAAGACAAAGGTTGGTTACTACTATGCTCCTAGCGGCAAGCCTTACCCTGATAACTGGATCATTACGGATGTCGTTTATGAGTTTGAAGGATCTCTAATCTCAAGGTCAGGGAATCTGGTTGAAGGGAACCCTGGAGCAATAAGTGGCGATGAGACGGTGCCATATCTCTCCCTTTCCTGGTGCAAAAACTGGCTTGGACCGAAAGTGAACATAACAAAAGCTCCACAGTCAGAGCATGATGGCTCAGATGTACAAATTAAATTGAATGTGGAACATCACCATGAAGAAGATATCGTTCCAAACATGACAAGATCACCAAGGGTGAAGTATATAACATATTATGAAGATTCTGAAAGTCTTCCTGGAAAGAGGACAGCAGTTTGGGAGCTTGATAAAGCAAATCACAGGAACATCGTTAGATCACCAGTGCTAATGAGGGAATTATGGCTTGAGATGTGGCATGATATCCATCCTGATGCAAAATCAAAGTTTGTAAAAAAAGCTAAGCGTGGTCCTTTAAGAGATGAGGACTGTTATTGGGATTATGGGAAAGCTCGTTGTGCATGGCCTGAGTACTGTGAATATAGGTATGTTTTTGGTGATGTTCACTTGGGACAAAGCTGCAGGTTGAGATATACTACAGCTGAATTGTTGTCGCATTATTTGTAA 2085 0.436 MVKVQKRPVKYKQKRARQLGYNSIQRSKVKNHFRLEFSFIRTLPNYRMVRVTFFSFFPPSLSLTMAKNPLLCSIVLLAVLAGATSDDGAELDYSKLSGIIIPGFASTQLRAWSILDCPYSPLDFNPLDLVWLDTTKLLSAVNCWLKCMVLDPYNQTDHPDCKSRPDSGLSGITELDPGYITGPLSSVWKEWIKWCIEFGIEANAIIAVPYDWRLSPSKLEERDLYFHKLKITFETAYKLRGGPSLVFAHSLGNHVFRYFLEWLKLEIAPKHYIQWLDQHIHAYFAVGAPLLGAMETIEATLTGFTFGLPISEGTARMMFNSFGSSLWMMPFSKYCRTDNKYWKHFSGGRQVGPPTYHCDEQEFKTNLSGWPTKIINIEIPSTRAFDAYPSFSEIPEANLSSMECGLPTQLSFSAREISDGTFFKAIEDYDPDSKRLLYLLEKSYLGDPVLNPLTPWDRPPIKNVFCIYGTDSKTKVGYYYAPSGKPYPDNWIITDVVYEFEGSLISRSGNLVEGNPGAISGDETVPYLSLSWCKNWLGPKVNITKAPQSEHDGSDVQIKLNVEHHHEEDIVPNMTRSPRVKYITYYEDSESLPGKRTAVWELDKANHRNIVRSPVLMRELWLEMWHDIHPDAKSKFVKKAKRGPLRDEDCYWDYGKARCAWPEYCEYRYVFGDVHLGQSCRLRYTTAELLSHYL 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01578 694 SUPERFAMILY alpha/beta-Hydrolases 225 538 IPR029058 -
Gma19g01578 694 Gene3D alpha/beta hydrolase 155 317 IPR029058 -
Gma19g01578 694 Pfam Lecithin:cholesterol acyltransferase 128 564 IPR003386 GO:0006629|GO:0008374
Gma19g01578 694 PANTHER BNAA09G50730D PROTEIN 71 677 - -
Gma19g01578 694 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 71 677 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01578 Gma-Chr19 45182875 45195872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01578 75 694 Acyl Lipid Metabolism Gene Families AT1G04010 77.244 0.0 1032
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01578 - - gmx:100806466 1363.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01578 19 45182875 45195872 Gma19g01578 19 45182875 45195872 ECH
Gma19g01578 19 45182875 45195872 Gma03g01524 03 41478025 41487828 GST