Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01575 ATGGAAGGGAGAGAGAGTTGTCACCCATTGCTGAGAGGAGGTAGGAGAAGAGAGGAGAAAGGTTACAACCATGGCTTATCCACCACTCAGATGCATGTCATGGCTGCCATATGTGATGCCCTCATTCCTTCCCTCCCACTCAACAAGGACACTTCACAAGACCAAGCTCTCTCAGACTTCTACAATACCTCTGCTTCTCAGCTCCCTTTTCCTGATGAGGCTGCAGAGCTGTTGTACAAGAGGACTGTGCCAGAAGCGGTGTCGTTGGTGAGTTGGGTTCTGTGGATACTGTCTTTCAGATTGGGGACACTGTTGCTCTGTGGAAGACTTTCCTTGGACTGGAAGTGGCCTTTCATTCGCAAGTTCTCTGAGATTTCCTTGGAGAAGAGAGAACAAATTTTCAGGAACTGGACCAGGGAAAAGAGTTGGGTAGCCTTACGGGTAGTGTTTGTGCTCATCAAACTCTTTTGCTTCTATAATTTCTTCTCAAGGACTGATGCAAATGGGCAAAATCCCACATGGAAAGCAATTGGATACCAAGTGGACACCAAGGAGAAGTTGATCAGAAAGGAGAGGCCTTTGGAAAAGGGATTAATAGAAACAATGTATGAAACTGATTCTACTTTGATCCAATCCCTCACTGAAAAAGGCCTTGAAGTCACTGAAGATAAAAGGCAGAACCTGTACAAGGTCAAATGTGATGTTGTGATTGTGGGGTCTGGTTGTGGTGGAGGAGTTGCAGCTGCAGTTCTTGCAAATTCTGGTCATAAAGTAGTAGTCCTTGAGAAAGGAGAGTATTTTGTTTCACATGATTATTCTTCCCTTGAAGGTCCATCCATGGATGAACAATACGAATCCGGCGGCATTATGCCGAGTCTTGATGGGAAGATGATGATCCTGGCTGGCTCAACAGTTGGTGGAGGCTCTGCTGTAAACTGGTCTGCAAGCATCAGAACACCTGATTCTGTTCTGAGGGAATGGTCTAAAAAATATAAAATTCCACTCTTTGGTAGCTCCGATTACCAATCTGCGATGGACTCGGTGTGCagaaggattggtgtaacagagaagtgcaagaaggaaagctttcagaaccaaattctcatacaaggatgcaatggtgcagTGATCCTCACTGGATGTAAAGCTGAGAGATTCATACTTGAAAATGGAAAGAATGGAATGAAGAAAAAGAAGTGCTTAGGAGTGATTGCTGCAGCAAGTTGGAGGAGTAAGGTAACAAAGAAACTCCAAATTGAATCCAAGGTAACCATCTCAGCATGTGGCTCTCTCAACACTCCTCCTCTAATGATTTCTAGTGGACTAAAAAATCCAAACATTGGAAGGAATCTCCATCTCCACCCTGTCCAATTTGCATGGGGTTACTTCCCAGAAGACATGACAACAAACTTCAGCGGCAACAACTACGAGGGGGGTATCATAACTTCGATCCACAAGGAATATGCAGAGGATTCCACCCCAAGGTTCATCATAGAAACACCTTCTCTAGGACCAGGATCTTTTTCGGCGTTTGTTCCGTGGCTTTCAGGGCAGGACATGAAAGACAGAATGGCCAAGTACGCAAGAACTGCCAACATTTTCGCATTGATACGAGACCAGGGATCAGGAGAAGTGAAGGCTGAAGGGAGAGTGACTTACAGACTTGACAAAGAAGACAAAGAAAGCCTTAGAGTTGGACTGAGGAAGGCATTGAGGATTTTGGTTGCAGCAGGTGCTATGGAAGTGGGAACATACAGAAGTGATGGCCAAAGAATCAAGTGTAAGGGGATGAAGGAGGAAGATTTGGAGGAGTTTCTTGACACTGTGACAATAGTTGGGGGTCCAAGGTCAAGGAATGAAGTGTGGACAGTGTTTACCACTGCACATCAGATGTCAAGTTGTAGAATGGGTGCCTCTGAAGAAGAAGGTGCACTCGATGAGAATGGTGAGACTTGGGAAGCAGAAGGCTTGTATGTGTGTGATGGGAGtgttttgcctagtgcagttggtgtcaaccccatgTTCTATAGAAAAAGATGGATGACTCGACGCCTGGTTGAGCTTGACGTTTCCAATATCATGCCAGCTTTTATTGTATGGCTAGCATCGGCACTCACAACAACCACATGCTAG 2133 0.4299 MEGRESCHPLLRGGRRREEKGYNHGLSTTQMHVMAAICDALIPSLPLNKDTSQDQALSDFYNTSASQLPFPDEAAELLYKRTVPEAVSLVSWVLWILSFRLGTLLLCGRLSLDWKWPFIRKFSEISLEKREQIFRNWTREKSWVALRVVFVLIKLFCFYNFFSRTDANGQNPTWKAIGYQVDTKEKLIRKERPLEKGLIETMYETDSTLIQSLTEKGLEVTEDKRQNLYKVKCDVVIVGSGCGGGVAAAVLANSGHKVVVLEKGEYFVSHDYSSLEGPSMDEQYESGGIMPSLDGKMMILAGSTVGGGSAVNWSASIRTPDSVLREWSKKYKIPLFGSSDYQSAMDSVCRRIGVTEKCKKESFQNQILIQGCNGAVILTGCKAERFILENGKNGMKKKKCLGVIAAASWRSKVTKKLQIESKVTISACGSLNTPPLMISSGLKNPNIGRNLHLHPVQFAWGYFPEDMTTNFSGNNYEGGIITSIHKEYAEDSTPRFIIETPSLGPGSFSAFVPWLSGQDMKDRMAKYARTANIFALIRDQGSGEVKAEGRVTYRLDKEDKESLRVGLRKALRILVAAGAMEVGTYRSDGQRIKCKGMKEEDLEEFLDTVTIVGGPRSRNEVWTVFTTAHQMSSCRMGASEEEGALDENGETWEAEGLYVCDGSVLPSAVGVNPMFYRKRWMTRRLVELDVSNIMPAFIVWLASALTTTTC 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01575 710 PIRSF Lg_Ch_AO 373 678 IPR012400 GO:0046577
Gma19g01575 710 PIRSF Lg_Ch_AO 13 374 IPR012400 GO:0046577
Gma19g01575 710 Gene3D - 218 482 IPR036188 -
Gma19g01575 710 Pfam GMC oxidoreductase 374 456 IPR000172 GO:0016614|GO:0050660
Gma19g01575 710 Pfam GMC oxidoreductase 234 373 IPR000172 GO:0016614|GO:0050660
Gma19g01575 710 Pfam GMC oxidoreductase 550 675 IPR007867 GO:0016614
Gma19g01575 710 PANTHER LONG-CHAIN-ALCOHOL OXIDASE FAO4B 4 373 - -
Gma19g01575 710 PANTHER LONG-CHAIN-ALCOHOL OXIDASE FAO4B 373 675 - -
Gma19g01575 710 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 4 373 - -
Gma19g01575 710 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 373 675 - -
Gma19g01575 710 SUPERFAMILY FAD/NAD(P)-binding domain 232 674 IPR036188 -
Gma19g01575 710 Gene3D - 537 676 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01575 Gma-Chr19 45153429 45157202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01575 4 675 Acyl Lipid Metabolism Gene Families AT4G28570 54.195 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01575 K17756 - gmx:100808951 1303.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01575 19 45153429 45157202 Gma19g01575 19 45153429 45157202 ECH
Gma19g01575 19 45153429 45157202 Gma03g01521 03 41457125 41458123 GST