LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma19g01565	ATGGGTTCTCTCCCTGTGCCCGCATTTCCATCCAAACACTGCCTTGACGAGAGCAGCCACATTGACGAAGCCACCCTCTCGGCGCTATTCAAGTCGCAGCAGAGCCACCTGAACTTCTTCTTCGACCACATCGACCACTCCCAAACCCTAGCCTTCACGCGCGCGCTCCTCAATGCCGCCGGCACCGTCTTCTTCACCGGCGTCGGAAAATCCGGCTTCGTCGCGCACAAGATCTCGCAGACGCTCGTCTCTCTGGGCGTTCGCTCCGCGTTCCTCTCGCCGGTGGACGCTCTCCACGGCGACATTGGAATCCTCACCAATCGCGATGTGCTCATCCTCCTCAGCAAGTCCGGCGCCACCGAGGAGCTCCTCCGCCTTGTGCCGTGTGCGAGGGCCAAAGGCGCGCTCCTCATCGCGCTCACCTCCGTTGAAGGCAACGCGCTCGCCGCGGCGTGCGACATGTCCGTGCATTTGCCGCTCCAGAGAGAGCTCTGTCCGTTCAACCTCGCGCCGGTGACATCCACCGCTATTCAAATGGTGTTCGGCGACACCGTCGCCATCGCGCTCATGGAGGCGAGGAATCTCACCAAGGAGGAGTACGCCGCGAACCATCCCGCCGGCAAGATCGGGAAGAGCCTCATCTTCAAGGTGAAGGATGTGATGAAGAAACAGGACGAGCTTCCAATTTGCAGAGAATCGGATTTGATTATGGATCAGCTCGTGGAACTCACAACTAAAGGATGCGGATGCCTCCTCGTTATCGGTGACGGTTACCGTCTGATCGGAACGTTCACCGACGGTGATCTCCGTCGTACTCTCCGAGCCAGCGGAGAAGCCATTTTCAAACTCACTGTTGGGCAAATGTGCAACAGGAATCCGAGAACTATTGGTCCGGAGGCAATGGCGGTGGATGCGATGAAGAAGATGGAGGCACCTCCATCGCCGGTTCAGTTTTTGCCTGTGATAAACGATGAAAGTATCTTGATTGGGATTGTGACCTTGCATGGTTTGGTTTCAGCTGGCTTGTGA	1029	0.5743	MGSLPVPAFPSKHCLDESSHIDEATLSALFKSQQSHLNFFFDHIDHSQTLAFTRALLNAAGTVFFTGVGKSGFVAHKISQTLVSLGVRSAFLSPVDALHGDIGILTNRDVLILLSKSGATEELLRLVPCARAKGALLIALTSVEGNALAAACDMSVHLPLQRELCPFNLAPVTSTAIQMVFGDTVAIALMEARNLTKEEYAANHPAGKIGKSLIFKVKDVMKKQDELPICRESDLIMDQLVELTTKGCGCLLVIGDGYRLIGTFTDGDLRRTLRASGEAIFKLTVGQMCNRNPRTIGPEAMAVDAMKKMEAPPSPVQFLPVINDESILIGIVTLHGLVSAGL	342

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma19g01565	342	Gene3D	-	21	211	-	-
	Gma19g01565	342	Gene3D	-	212	340	IPR046342	-
	Gma19g01565	342	Pfam	SIS domain	57	187	IPR001347	GO:0097367\|GO:1901135
	Gma19g01565	342	Pfam	CBS domain	285	340	IPR000644	-
	Gma19g01565	342	Pfam	CBS domain	217	273	IPR000644	-
	Gma19g01565	342	CDD	CBS_pair_SIS_assoc	213	338	-	-
	Gma19g01565	342	ProSiteProfiles	CBS domain profile.	289	342	IPR000644	-
	Gma19g01565	342	PIRSF	KdsD_KpsF	11	342	IPR004800	GO:0005975\|GO:0016853
	Gma19g01565	342	ProSiteProfiles	SIS domain profile.	52	195	IPR001347	GO:0097367\|GO:1901135
	Gma19g01565	342	PANTHER	-	1	342	-	-
	Gma19g01565	342	SUPERFAMILY	SIS domain	35	341	IPR046348	GO:0097367\|GO:1901135
	Gma19g01565	342	CDD	SIS_Kpsf	61	188	IPR035474	-
	Gma19g01565	342	TIGRFAM	kpsF: sugar isomerase, KpsF/GutQ family	61	332	IPR004800	GO:0005975\|GO:0016853
	Gma19g01565	342	ProSiteProfiles	CBS domain profile.	221	280	IPR000644	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma19g01565	Gma-Chr19	45027048	45028969	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma19g01565	K06041		-	gmx:100805755	671.003

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma19g01565	19	45027048	45028969	Gma19g01565	19	45027048	45028969	ECH