Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01523 ATGCTTCCTTTGCCGTCTTCATTCACCAAACCAAACTCCCACACTTCACAATTCACAAATCACACTATGCAACATTTTCACCCGGAGCCCCACATCGCTCCCACCGTCTCTTCCGACGCTAAGCGTAGCGGCAAAAAGCGCGGCAGCTACAACTGCGGCCGCTGCGGCCTCCCTAAGAAGGGCCATGACTGCACCGGCAAGACCGCCCCCACTCCCACCTCCGCTTCTTCCGCCACCCCTTCCCACTCCTCTTTCTCCGCCGTTTCCGCTCCTTCCTCCGGCTCCGCCTCCCGCCGCCCGCTGTCTCACCTCCGCCGCGCTCTCTCCTTCGACGAGGACGAAGCCGGCAGGCTCGATCCGTCGGAGCCCGCCGATGTGTGGTCTGTAGAGGATGATCTGGATTCGTCTGGTTTGCCGGGGAATCTTCTATGGGAAGTGTTGAGGAGGCTGCCGCCGGCGGGGCTGTTAACGGCGGCGATGGTGAGCAGAGGTTGGAGGGAGATGACAAGGAGTTTGTGGAGAGCGGCGGAGGAGTTAAGGATTAGGGTTCCGGCGTGGGCTCAGGTGGGTTTTGTGTCGTCAATTTTGCAGAAGTGTCCGGGGATCGTGACACTCTCTCTTAAAATGGAAAGTGATGTGGATTCCACGATACTGGCTTGTATTGCGTTCTCGTGCCCTAATTTGGCATTCTTGGAGATCTCGGTCTCTGATCCTGCAGTTAATCGGATCAGCGGgggtgaatttgctcgatttgttgctgataaaaagagcctcaaaagcctcaagatggaaggttgttctaaccttggaggttttgttctttgttcgtctagtctttctaccctttggctgtctgatttatactctctgtctaaaatgGTCTTTAATTGTCCTCAGTTGAGAGAGGTTTCATTGGAGTTTGCTCACCAAGAAAGTGACAGTACTGATCTTACAACCATGGTTGAAGGTTTGGGAAGAAGTTGCCCGAGGTTGAAAAACATACATATATCTTCAATGCATCTTTCTCATGCTGCTGTGCTTGCTCTTACTGCTGCTCAGTTAAGGGGGCTGCGAATGCTTTCACTTGTTCTTGGATCCGAAGTTACCGATGCATCTGTTGCTGCAATTGCCTCAAGCTATCTAAATCTGGAATTGCTTGATCTCAGTGGATCCAGCATCAGTGACAGTGGCATTAGCATGATTTGCAATGTGTTCTCTGAAACATTGACAAGGCTCCTTCTCGCTCTTTGCCCCAATGTGACTTCAAGTGGCATTCAATTTGCTACGGCTCAATTGCCACATCTTGAACTTATGGACTGTGGCATGACCATATGTGAACCTAATTCCCACCATCCAACTGCTGATGAAAGTAACCGCAAATTACAGAAAACATTTGCTACTAATCTACACCTTACAAACCAAAAGCTAATAATCAAACATAGTTGTTTAAAGAAACTTAGTTTGTGGGGATGCTCAGGCTTGGATGCCTTGTATTTAAACTGCCCACAACTCAATGATCTTAATCTAAATTCTTGTAGAAATTTGCATCCAGAGAGACTGTTGCTTCAGTGCCCCAGTCTAGAAAATGTGTATGCATCTGGTTGTCAGGACATGTTAATTGGGGCTATCCAAAGTCAGGTTTGCAATGCTTTTACTGATATGGAAAACCCTTCACCTTGTAAGCGTTTACCTGATGGCTCCAAAAGGGTTCGGGTACCTCATTTAGTTAATACTGAGTCGCCTGAGGATGAGAAGAAGGGAAGGAGAAAGAAGAGACGGCTTTGTAACGTGGTTGTTGATTGA 1803 0.4526 MLPLPSSFTKPNSHTSQFTNHTMQHFHPEPHIAPTVSSDAKRSGKKRGSYNCGRCGLPKKGHDCTGKTAPTPTSASSATPSHSSFSAVSAPSSGSASRRPLSHLRRALSFDEDEAGRLDPSEPADVWSVEDDLDSSGLPGNLLWEVLRRLPPAGLLTAAMVSRGWREMTRSLWRAAEELRIRVPAWAQVGFVSSILQKCPGIVTLSLKMESDVDSTILACIAFSCPNLAFLEISVSDPAVNRISGGEFARFVADKKSLKSLKMEGCSNLGGFVLCSSSLSTLWLSDLYSLSKMVFNCPQLREVSLEFAHQESDSTDLTTMVEGLGRSCPRLKNIHISSMHLSHAAVLALTAAQLRGLRMLSLVLGSEVTDASVAAIASSYLNLELLDLSGSSISDSGISMICNVFSETLTRLLLALCPNVTSSGIQFATAQLPHLELMDCGMTICEPNSHHPTADESNRKLQKTFATNLHLTNQKLIIKHSCLKKLSLWGCSGLDALYLNCPQLNDLNLNSCRNLHPERLLLQCPSLENVYASGCQDMLIGAIQSQVCNAFTDMENPSPCKRLPDGSKRVRVPHLVNTESPEDEKKGRRKKRRLCNVVVD 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01523 600 Pfam F-box domain 136 171 IPR001810 GO:0005515
Gma19g01523 600 SMART LRR_CC_2 328 352 IPR006553 -
Gma19g01523 600 SMART LRR_CC_2 354 379 IPR006553 -
Gma19g01523 600 SMART LRR_CC_2 380 404 IPR006553 -
Gma19g01523 600 SMART LRR_CC_2 501 524 IPR006553 -
Gma19g01523 600 Gene3D Ribonuclease Inhibitor 130 311 IPR032675 -
Gma19g01523 600 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 27 599 - -
Gma19g01523 600 MobiDBLite consensus disorder prediction 559 589 - -
Gma19g01523 600 MobiDBLite consensus disorder prediction 1 24 - -
Gma19g01523 600 MobiDBLite consensus disorder prediction 1 100 - -
Gma19g01523 600 PANTHER F-BOX/LRR-REPEAT PROTEIN 17-LIKE ISOFORM X1 27 599 - -
Gma19g01523 600 Gene3D Ribonuclease Inhibitor 312 454 IPR032675 -
Gma19g01523 600 SUPERFAMILY RNI-like 193 539 - -
Gma19g01523 600 MobiDBLite consensus disorder prediction 67 99 - -
Gma19g01523 600 ProSiteProfiles F-box domain profile. 132 176 IPR001810 GO:0005515
Gma19g01523 600 MobiDBLite consensus disorder prediction 575 589 - -
Gma19g01523 600 SUPERFAMILY F-box domain 136 178 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01523 Gma-Chr19 44583452 44588648 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01523 - - gmx:100792669 1115.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01523 19 44583452 44588648 Gma03g01462 03 40855427 40869051 GST