Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01516 ATGCCTTTCACAATGAAGATTCAGCCGATCGATTCGCCCGTGCCGGAGGAGGCTACTCGGCTTGAGCCGGTGAAGCCGGCGGTGAGGTCGCGCCTGAAGCGCCTCTTCGAGCGCCAGTTCTCCGGCGTCCTCAGGAACTCATCGGCGGCGGAGAAGATCGCCTACCCCGCCGAGGAGCCGCCGCATTCCGCCAAAGACGGCTCCGCTGATTTCGAGCCGAGCTCGGTGTGTCTGGCGAAAATGGTGCAGAATTTCATGGAAGAGAATCACGAGAAGCACTCTGTTTCCGTGAAGTGCGCGCGCAGCCGCTACAATAGCTTCGACGACGCCTCCGACGCCGAAACGCACTCGCTTTTCGGCGAGTCCAATTATTCTTTCTCCGGCGAAACACAAGAAATCCTCAAGGATTTGGTGACATGTGCGAGTGTCAGTGAAAGGAATTTGCTAGCGGACACTACAAAGATCATTGAGAAGAATAAAACAACGTGCAAACGCAAAGACGATTGTTGCAGAAAGATCGTTACTGAAGCGTTGTTAGCTCTCGGATACGACGCTTCCGTATGCAAATCTCGCTGGGAAAAATCAACTTTCTGTCCAGCTGGGGAATATGAATACATTGATGTGATAATGGGAAAGGAGCGGGTGGTGGTTGACGTTGACTTCAGATCAGAATTCGAGATAGCTCGACCCACCAAGACCTACAAAGCGATCCTCCAAACGCTGCCTTACGTATTCGTTGGCACGTGCGAGCGGTTGCAGAGTATCGTGGCCATCGCTTCAGAGGCGGCGAAACTGAGTCTGAAGAAAAGGGGCATGCACGTTCCGCCGTGGAGAAAAGTCGAATACGTCACCGCGAAATGGCTCTCCCCTTACACGTGCTCGCGCGGGGTGAAAGAGGAAACAGAAGAGAAAGAGCACCTTGCGAAAGAGTTGGTGGTGTTATCAACTTCGTGTGGAAGTTTCCGTGAAGATGATGAAAAGTCAAAGTCAAAACTCGTGGTTCAGAATCAGAAGCCACCGGAGATGAAACCCAAAAGTTCTCAGTCCGGTTTGgcagctgtgttcctagaaaacccaaaattttga 1086 0.5092 MPFTMKIQPIDSPVPEEATRLEPVKPAVRSRLKRLFERQFSGVLRNSSAAEKIAYPAEEPPHSAKDGSADFEPSSVCLAKMVQNFMEENHEKHSVSVKCARSRYNSFDDASDAETHSLFGESNYSFSGETQEILKDLVTCASVSERNLLADTTKIIEKNKTTCKRKDDCCRKIVTEALLALGYDASVCKSRWEKSTFCPAGEYEYIDVIMGKERVVVDVDFRSEFEIARPTKTYKAILQTLPYVFVGTCERLQSIVAIASEAAKLSLKKRGMHVPPWRKVEYVTAKWLSPYTCSRGVKEETEEKEHLAKELVVLSTSCGSFREDDEKSKSKLVVQNQKPPEMKPKSSQSGLAAVFLENPKF 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01516 361 PANTHER RNA POLYMERASE SUBUNIT BETA-BETA PROTEIN, PUTATIVE (DUF506)-RELATED 25 354 - -
Gma19g01516 361 Pfam PDDEXK-like family of unknown function 80 292 IPR006502 -
Gma19g01516 361 PANTHER OS03G0796600 PROTEIN 25 354 IPR006502 -
Gma19g01516 361 TIGRFAM A_thal_3542: uncharacterized plant-specific domain TIGR01615 171 292 IPR006502 -
Gma19g01516 361 MobiDBLite consensus disorder prediction 321 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01516 Gma-Chr19 44511158 44513267 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01516 - - gmx:100796711 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01516 19 44511158 44513267 Gma10g00298 10 2762120 2764254 PCT
Gma19g01516 19 44511158 44513267 Gma02g01304 02 15122037 15124274 PCT
Gma10g00298 10 2762120 2764254 Gma19g01516 19 44511158 44513267 PCT
Gma02g01304 02 15122037 15124274 Gma19g01516 19 44511158 44513267 PCT