Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01458 ATGCCGCCTAGTCGTAGAAAGGGCGGAAAGAAAAGCGCCGGCGGTGCCGCCGCCTGCCGGCAGTTTAAGCTCGGCGATCTCGTGCTCGCTAAGGTTAAGGGGTTCCCTGCTTGGCCTGCGACGGTGAGTGAGCCGCAGAAGTGGGGTTACTCTGCTGATCGGAAGAAAGTATTTGTTTGCTTCTTTGGAGCCGCCCCACAAATAGCTTTCTGCAATCCTGCCGATGTTGAAGTATTTACTGAAGAGAAGAAACAATCTCTTGCCAAACGTCCAGGAAGAGGTGGTGAATTTGCTCGTGCAGTAAAGGAGATTATTGAATGTTATGAAAAATTGAGGACTGAGAATCAGGATGGTGACACAGGGTCAAAGGAGCAGATGGATGAGTCATATTCACCTGATCCATCTGCCAACACAGGGGCAAAGGAGCAGATGGATGCTCCTTTCACAATTAATTCACAAATGAAATCTTCAAATTGTGTGATTGACAGACCTGAGGATGCTGTTGCATTGAAGGATGAATCTTATAATATAGAAGCATCATTGGAGGAAGCTACTGATAATGCTATTATGACTGCAACTGTAAAATCACTTTTTTCAACAACCCAGAGAAATGCACCAGTTCAAAGGTCTAGAAGCACATTACAGGTCCAAAACTTTGTTTTACCTTATAGTGATGGTGGAAATAATGGCAGCAATAGTAATGACAACATATCAGCTGATGCAATTGAGGATACATCTATAAGAAGGAGAAAACATATCAGGAAATCACCTGACCTTTTAGGTTGTGATGATACTGATTCACCTGCATTTGCTCCAAATGTTAGCATGGAGGACAATGGTTCTGAAATTATTACAATCATTTCTGATGCCTTCACTTTAAATGAGGGAAGTACGATAGATTCTAATTTAAAACTTGAACAGTCTGAGCCTATTGAGTGCCCTGAAGGTGAAGATGATTTGAACAAAGGTCTTGATCTAGAAATAAAGGCTGTAATCAACAAGAAGAAAAGAAAACCAAACCGGAAAAAGGAAACTAATGATTCTGGTGCTCAGAATGCCAGCCAAAGTTTGCAGAATATGGGTGGAAATTCTAAAGAAAGATGCCCTGATCAAGATGGAGATGAACACTTGCCCCTGGTGAAACGAGCTAGAGTTAGAATGGGTAAATCATCCGCAGAGGCAGAACTCAATAGCATTGCACAAGTTCAGGTTAAATGTGGCGAGGAAGATATTACTGACTCACCACATCAGATAATCACATCCTCAAATTGTGAAAATGGTAGCCTTGCTGAAGGAGGCACATCAGTGTTGAATAGTGCTTTGGTTAGTGTTTCTCCTTCTAACTTAATAGCTCTGTGTTCTGAAAATGGGTCTCAGATTTGTAAAATTAAAAAGGACCAAATGTTTGGCTGCTCTGTGGATGATGAAGCTGCTTTACCTCCATCTAAACGCATCCATCGTGCTTTAGAAGCAATGTCTGCCAATGCTGCTGAAGAAGGTGAAGCTTGCATGGAATCCTCCTCTATAATGACATCAAGTGGTAGATGCTGTATATCTACCATTAAGAGATGTCCTTGTATGACCGTTAACAATCAAGGAGGTAATGATTTAGAACTGCAAAGGTTGGATTCTTGTGGCATTGATTCATCTCATGTTAGTATGTATAGTTTCTCAACTCGTTCGAATACAATTATTTCCACAGAGAATGAGTCATCTACAGAAGTGGATAAGCATTTGGCCAAGTTCCAATGTGAAACTGGGAAGGATGTCATCCCAGGTGATAGACAGCAAGGTGGTGAAGATCTTAGTGATTCTGTTGTCTGTCATCCTGCCAAAATAGATTCACAAATACAATCACATGGAAAAATTTCTCCTGATCTTGATGTAAAATGTTGCCAAGTTGGAAACAGTAAGGATTCACCATGTCCATCATTGTTACCAAATGGTGATTACAATGTCAGACCTTCAAACCATTCAGATGCATCTGATACATTAGAGCATGGTGGAATAAGTCTTGATCCTGTGGCAGGTGACGGTGAAAGTGATAAATTGGTACCTCAAAATAGTATTAATGTGCCACAGAATGTGGTGGTTGCTTGTGAGGATATGGGGAAGCAAGCAGTTGGTGGCAGCAGCAAAATTAATGACACGCATGAGGTTGTCAAAGAGGTAAAATTTAAAGGACAAGAGGAGGATATGAATTCTGTTTCAATATCAAATGATTATTCAGGTGAAAAGGGTAATTTGGTCATTCTGTCAAGTCCATCCTTGACTGATGGGAGAGTTTTCCTTCCACTAGGTTCACCTCCAAATACATCAGTTTGCAATATTTCTACATCAGACAGTAGTAATATCCTTCAAAATGGAAGTTGTAGCCCTGATGTACACCAGAAGAACACTTTATCTGGTCCTACTGATGGATGGAAAGATGGGATTGTGGAAAATGGACGATCAAGATCTGTGGGCAAGTCAACTGAAGCAGGAGATGCTGCATTGTTGTACTTTGAAGCAACGCTTAGGACATTGAAAAGGACAAAGGAAAGTATTGGTCGAGCAACACGCATAGCTATTGACTGTGCAAAGTTTGGCATTGCAACTAAGGTGATGGAAATTCTTGTCCATGATCTGGAAATTGAGTCAAGCCTGCATCGGAGGGTGGATCTGTTTTTTCTTGTTGACTCTATTGCTCAATGTTCTCGAGGGTTGAAAGGAGACATTGGTGGAGTATATCCATCTGCTATGAAAGCAGTCCTGCCACGCCTCTTGTCTGCTGCTGCCCCTCTGGGAAATGCTGCAAAAGAAAATCGTAGGCAGTGTCTTAAGGTATTAAGACTGTGGTTGGAGAGAAAAATCCTTCCTGAACCCATTATTCGGCATCATATGCAGGAACTAGACTCGTATAGCAGTTCAGTTTCTGCAGGTGTCCACTCACACCGTTCTTTAAGAAGAGACAGGCCTTTTGATGACCCTGTTAGAGACATGGAGGGTATGCTTGATGAATATGGAAGCAACTCAAGTTTTCAGCTACCTGGATTTTGCATGCCCCGAATGCTTGGAGATGGAGGGAGTGATTCTGATGGAGGGGAGTTTGAGGCTGTCACACCTGAACATGATTCTGAAACATATGAAGTGCAAGAAACAACTCATGCAATTGAAAAACGCAGGCATGTGTTGGAAGATGTTGATGGTGAGCTTGAAATGGAAGATGTGGCTCCGTCTGTTGATGGTGAATTGAATTCGATTTGTAATATTGATAGAGGAAATGCCAGAGAGTTTGAGAAGAATCTTCCTGTGTCCTTTGGCCCCCCTTTACCCCAGGATTTGCCACCGTCCTCCccacctccaccatcatcccctccaccaccaccaccaccacctccTCCTCCTCCTCCATCTCTACCTCTACCTCCACCCCCACCTCCTACATTGCACTTCAAGTCAGCTACCTCTGATCAATATCATGTTGCAGTTGATTCAAAAGGTTTTGAAGATTCATTGACTGTGAAAGCCAATGTACTCCATCCAATGGCCGAGCCCTTAGCTGCACCAAGAAATAGTCAACCTATCAGTGACGCAGTGCAGTATACAGTCCCTGAATGTAGAGACATGCCAATGCAGATGCCAGAGTCTACTTGCTCTTTCAACACTTTCCCTGTACAACCAACAGACAATTCCAGGAATACTGATGGTGCTACTATGCATAATAAAGGTTACTTGATACCACCACCTCACCATGTGCCATCCAATCAGTTTTCTTTTGTTCATGGGGAACATCGTATGAAGCCACAAAGGGAGGTTCCGCCACCCCCTTCATATTCCAATGGGCACCACTTTATGCCAAGCATGACGAGAGAGTATGGTTATGACAATCATGAGAGATTAAGACCACCATATGATTACCAAGAGAGATGGAATGTTCCTCCTTGTTCTGGTCCTCGGTATCATGACAGAGGTGTGCCTGCTCCTTATGGTTGTCATCCTAGTGAATCAGTTAGTTTTCCAGGTCATGGATGGAGATTTCCTCCCCCGTCAATGAATTACAGGGACTCCTTGCATTTTAGACCACACTTTGAAGATGCAATTCCAGTAGCAAACCGAGGCCCAAACTTTTGGCAGCCAAGATGA 4125 0.4225 MPPSRRKGGKKSAGGAAACRQFKLGDLVLAKVKGFPAWPATVSEPQKWGYSADRKKVFVCFFGAAPQIAFCNPADVEVFTEEKKQSLAKRPGRGGEFARAVKEIIECYEKLRTENQDGDTGSKEQMDESYSPDPSANTGAKEQMDAPFTINSQMKSSNCVIDRPEDAVALKDESYNIEASLEEATDNAIMTATVKSLFSTTQRNAPVQRSRSTLQVQNFVLPYSDGGNNGSNSNDNISADAIEDTSIRRRKHIRKSPDLLGCDDTDSPAFAPNVSMEDNGSEIITIISDAFTLNEGSTIDSNLKLEQSEPIECPEGEDDLNKGLDLEIKAVINKKKRKPNRKKETNDSGAQNASQSLQNMGGNSKERCPDQDGDEHLPLVKRARVRMGKSSAEAELNSIAQVQVKCGEEDITDSPHQIITSSNCENGSLAEGGTSVLNSALVSVSPSNLIALCSENGSQICKIKKDQMFGCSVDDEAALPPSKRIHRALEAMSANAAEEGEACMESSSIMTSSGRCCISTIKRCPCMTVNNQGGNDLELQRLDSCGIDSSHVSMYSFSTRSNTIISTENESSTEVDKHLAKFQCETGKDVIPGDRQQGGEDLSDSVVCHPAKIDSQIQSHGKISPDLDVKCCQVGNSKDSPCPSLLPNGDYNVRPSNHSDASDTLEHGGISLDPVAGDGESDKLVPQNSINVPQNVVVACEDMGKQAVGGSSKINDTHEVVKEVKFKGQEEDMNSVSISNDYSGEKGNLVILSSPSLTDGRVFLPLGSPPNTSVCNISTSDSSNILQNGSCSPDVHQKNTLSGPTDGWKDGIVENGRSRSVGKSTEAGDAALLYFEATLRTLKRTKESIGRATRIAIDCAKFGIATKVMEILVHDLEIESSLHRRVDLFFLVDSIAQCSRGLKGDIGGVYPSAMKAVLPRLLSAAAPLGNAAKENRRQCLKVLRLWLERKILPEPIIRHHMQELDSYSSSVSAGVHSHRSLRRDRPFDDPVRDMEGMLDEYGSNSSFQLPGFCMPRMLGDGGSDSDGGEFEAVTPEHDSETYEVQETTHAIEKRRHVLEDVDGELEMEDVAPSVDGELNSICNIDRGNAREFEKNLPVSFGPPLPQDLPPSSPPPPSSPPPPPPPPPPPPPSLPLPPPPPPTLHFKSATSDQYHVAVDSKGFEDSLTVKANVLHPMAEPLAAPRNSQPISDAVQYTVPECRDMPMQMPESTCSFNTFPVQPTDNSRNTDGATMHNKGYLIPPPHHVPSNQFSFVHGEHRMKPQREVPPPPSYSNGHHFMPSMTREYGYDNHERLRPPYDYQERWNVPPCSGPRYHDRGVPAPYGCHPSESVSFPGHGWRFPPPSMNYRDSLHFRPHFEDAIPVANRGPNFWQPR 1374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01458 1374 MobiDBLite consensus disorder prediction 331 375 - -
Gma19g01458 1374 SUPERFAMILY Tudor/PWWP/MBT 19 116 - -
Gma19g01458 1374 MobiDBLite consensus disorder prediction 346 365 - -
Gma19g01458 1374 MobiDBLite consensus disorder prediction 112 126 - -
Gma19g01458 1374 MobiDBLite consensus disorder prediction 1022 1048 - -
Gma19g01458 1374 ProSiteProfiles PWWP domain profile. 24 82 IPR000313 -
Gma19g01458 1374 MobiDBLite consensus disorder prediction 112 141 - -
Gma19g01458 1374 MobiDBLite consensus disorder prediction 127 141 - -
Gma19g01458 1374 MobiDBLite consensus disorder prediction 1094 1146 - -
Gma19g01458 1374 Pfam PWWP domain 25 108 IPR000313 -
Gma19g01458 1374 MobiDBLite consensus disorder prediction 1102 1144 - -
Gma19g01458 1374 Pfam CID domain 835 958 IPR006569 -
Gma19g01458 1374 MobiDBLite consensus disorder prediction 1030 1048 - -
Gma19g01458 1374 Gene3D - 14 119 - -
Gma19g01458 1374 SMART 558neu5 834 965 IPR006569 -
Gma19g01458 1374 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1374 - -
Gma19g01458 1374 SMART PWWP_4 22 80 IPR000313 -
Gma19g01458 1374 ProSiteProfiles CID domain profile. 827 968 IPR006569 -
Gma19g01458 1374 Gene3D - 833 972 IPR008942 -
Gma19g01458 1374 PANTHER PWWP DOMAIN PROTEIN 1 1374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01458 Gma-Chr19 43786759 43801339 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01458 - - gmx:112997599 2659.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01458 19 43786759 43801339 Gma19g01458 19 43786759 43801339 ECH
Gma19g01458 19 43786759 43801339 Gma03g01395 03 40060769 40071463 GST
Gma19g01458 19 43786759 43801339 Gma10g00237 10 2186629 2199066 PCT
Gma19g01458 19 43786759 43801339 Gma02g01359 02 15725248 15736128 PCT
Gma10g00237 10 2186629 2199066 Gma19g01458 19 43786759 43801339 PCT
Gma02g01359 02 15725248 15736128 Gma19g01458 19 43786759 43801339 PCT