Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01455 ATGTTGTTCTTCTCGTACTTCAAGGATTTGGTGGGGAGGGAAGTAATCGTGGAGCTGAAGAACGATTTGGCCATCAAAGGAACATTGCATTCTGTTGATCAGTACCTCAACATCAAGCTCGAAAACACTAGCGTCGTCAATCAAGAAAAGTACCCTCACATGCTTTCTGTAAGAAACTGCTTCATCAGAGGTTCGGTAGTGAGATATGTGCAATTGCCTCCAGAAGGGGTGGACATTGAATTATTGCACGATGCCACAAGAAGAGAAGCCCGGGGCGAAGGAAACTCTTTTCAGATGTTAAAGcaaacccccagGTTTTGCTTGATTTTAAGCAGTGAACAAGCAAGAACGATCACAGGAGGGCCACAGTGGGAAGGCAGATGGCTGTTAGACACAACTACCGAGGGCCTCAAAGATCTAGCCGATTTTCTTCCAGCTTCTTTGGTTACCATTGCAAGCTACTTTTCAGCTGAAGATACGCGGGACATATGGAAGCCAGCTTTTATGGATGGAACTGACTGGATTAGCCCTGCTGCAAATTTAGCTCTTGTTGAGCAACAGATAAAGAAAATCTTAGCAGCCACAGGTGTCGATGTCCCAAGCCTTGATATAGTATTTTTAATTCCTGTAGATGGGAATTCTCCAGCTACACTTCCTTTGCCTTTGGCAGCTTTTGTAAGCCTCACAATTACATATAAACTTGACAAAGCCACTGAACGATTCCTTGCACTGATTGCCCCTGCTGGGAGTGCCCTTGCTTCTGGTTGTTCCTGGCCCTCCTTGCCCATTGTGACGTCTTTGTGGATCCAGATGGTGAAGCGTTGGAGTAACTACTTCGTGCTCTCTGCTTCCAGCACTGTTTTCCACCACAACAAGGATGCTATAGTTCAACTACTTAAAAGTTGCTTCACATCCACCCTTGGGCTAGGCTATGGCAGCATTTATAATAACAGTGGTGCCAGTGCCCTCCTCGGTGTACCGGTCTATTGGAGATATCACGTTATTGATTGA 1011 0.451 MLFFSYFKDLVGREVIVELKNDLAIKGTLHSVDQYLNIKLENTSVVNQEKYPHMLSVRNCFIRGSVVRYVQLPPEGVDIELLHDATRREARGEGNSFQMLKQTPRFCLILSSEQARTITGGPQWEGRWLLDTTTEGLKDLADFLPASLVTIASYFSAEDTRDIWKPAFMDGTDWISPAANLALVEQQIKKILAATGVDVPSLDIVFLIPVDGNSPATLPLPLAAFVSLTITYKLDKATERFLALIAPAGSALASGCSWPSLPIVTSLWIQMVKRWSNYFVLSASSTVFHHNKDAIVQLLKSCFTSTLGLGYGSIYNNSGASALLGVPVYWRYHVID 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01455 336 Gene3D - 1 94 - -
Gma19g01455 336 SUPERFAMILY Sm-like ribonucleoproteins 3 93 IPR010920 -
Gma19g01455 336 CDD LSm2 2 90 IPR016654 GO:0006397
Gma19g01455 336 Pfam LSM domain 7 71 IPR001163 -
Gma19g01455 336 PANTHER OS07G0681500 PROTEIN 134 326 IPR039638 GO:0016592|GO:2000762
Gma19g01455 336 SMART Sm3 5 72 IPR001163 -
Gma19g01455 336 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 33A 134 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01455 Gma-Chr19 43748057 43758637 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01455 - - gsj:114405248 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01455 19 43748057 43758637 Gma19g01455 19 43748057 43758637 ECH
Gma19g01455 19 43748057 43758637 Gma03g01392 03 40025820 40039527 GST