Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01432 ATGAGGCGAGTGTGGAGATTCTCTTCCGACGCAACAAGGCGAGCTCAGTTGTTGTTGCTCTTGCAATCCCATTATTTCCATGGATTCTCAAACCCCAAAACCACTCCCTCTTTGGCCACGGCGCTATCTCATCATCGCAATCTCAATTCCGTGCCAAACGCATGCTCTGACCTCATTCCCTTGTTCACTGCCAAGTCTTGCTCTTCAGCCAAAGAGGATCTCATCAACAAGGCCTCCATTCTGAAGAACGAGCTCATACGAGAATCCAGCGACTCTGCTAGGGTTCTGAGCATTTTGGACGATAATTCCGACACTTTGATTCAGCGTCACCCCGATGGATCTGTGTTGCTCAGGCTTATGAATCAATTGAATTCAAATCCTTCCCTTGCCCTCCAGGTGTTTAGTTGGAGAAGAAAGAGATCAAATGTTGAAAACCCTATGGATGCGTATGAGTACTCAAAGGGTATAAAAGCTGCAGGTAGATCTGGGAATGTTGATTTAGCTGTTAAGCTCTTTAAGGAGGCTGCTGTCAAAGGTATCAAGACGACCAGCACTTACAATGCGCTTATGGGTGCTTGTATGTCCAATGGTCTTGCTGATAACTGCCAGTCCTTGTTTTGTGATTTGAAGAGGGATCCGACTTGTGATCCTTCTATTGCCACGTACAATATTCTTCTATCTGTTTTTGGTCGCTTGATGCTGGTTGATCACATGGAAGCAACATTTAGGGAGATACAAAAGTTAACCTTCACCATGAACATCTGCACTTACAATCACATGATTGCTGGATATATCACGGCTTGGATGTGGGATGATATGGAAAATGTGTTTCAAATGTTGAAGAGGAGCCCCGTTGAGCCTAACATGAAAACCTACATGCTAATGCTTCGTGGGTATGCAAATTCAGGTAATCTGGAAAAGATGGAAGAGATATATTCCTTTATAACGGATCGTGTTGATATAAAGGAAATTTCATTAATCAGATGTATGATATGTGCCTATTCTAGAAGTTCTGATGCAGATAGACTTAAGAAGATAGAATTATTGTTGAAGTTTATTCCAGGAAAAGAGTACAGGCCATGGTTAAATGTTTTATTGATTAAACTCTATGCCAAGGAAGACTGGTTAGAGAAAATGGAGAATGCTATAAATGAGGCATTTGAGCATGGGACTTCTATAACAACCAAGGGTATTTTGAGATGCATAGTTGCAACTTATTATCGATACAATGCAGTAGAAAAGCTAGAAAATTTTGTGAGACGTGCTGAAATCTCTGGGTGGAGTATCTGCCGATCCGCATATCATTGTAAGCTAGTCATGTATGGGTCACAGCTGCCCTTAATGCATAATGTCCTTGAGGAGATGGAAATGGTCAACCTTGAATGCACAAAGAAAACATTATGGATAATTTCCTTTGAGTGCATTTCCATCATGAAATATATTCCCCGAGGTTCTACCATTCGAGTTGTATCTGGAACATTTTCAAATGAAACATGTCACTTTGCATTTTACTCTATTTGGAAAAGAGAACATAGTAGACATAGATGTCATTCAAATACTGATAATTGCTCCGGTGACAAATTGATTCTGTAA 1593 0.408 MRRVWRFSSDATRRAQLLLLLQSHYFHGFSNPKTTPSLATALSHHRNLNSVPNACSDLIPLFTAKSCSSAKEDLINKASILKNELIRESSDSARVLSILDDNSDTLIQRHPDGSVLLRLMNQLNSNPSLALQVFSWRRKRSNVENPMDAYEYSKGIKAAGRSGNVDLAVKLFKEAAVKGIKTTSTYNALMGACMSNGLADNCQSLFCDLKRDPTCDPSIATYNILLSVFGRLMLVDHMEATFREIQKLTFTMNICTYNHMIAGYITAWMWDDMENVFQMLKRSPVEPNMKTYMLMLRGYANSGNLEKMEEIYSFITDRVDIKEISLIRCMICAYSRSSDADRLKKIELLLKFIPGKEYRPWLNVLLIKLYAKEDWLEKMENAINEAFEHGTSITTKGILRCIVATYYRYNAVEKLENFVRRAEISGWSICRSAYHCKLVMYGSQLPLMHNVLEEMEMVNLECTKKTLWIISFECISIMKYIPRGSTIRVVSGTFSNETCHFAFYSIWKREHSRHRCHSNTDNCSGDKLIL 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01432 530 Gene3D Tetratricopeptide repeat domain 73 248 IPR011990 GO:0005515
Gma19g01432 530 Gene3D Tetratricopeptide repeat domain 249 316 IPR011990 GO:0005515
Gma19g01432 530 Pfam PPR repeat 156 179 IPR002885 -
Gma19g01432 530 Pfam PPR repeat family 253 301 IPR002885 -
Gma19g01432 530 Pfam PPR repeat family 182 229 IPR002885 -
Gma19g01432 530 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 253 287 IPR002885 -
Gma19g01432 530 PANTHER EXPRESSED PROTEIN 1 470 IPR044179 GO:0003729
Gma19g01432 530 PANTHER OS05G0407900 PROTEIN 1 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01432 Gma-Chr19 43596425 43599445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01432 152 378 Miscellaneous Gene Families AT4G11690 21.304 7.80e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01432 - - gmx:100816768 936.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01432 19 43596425 43599445 Gma19g01432 19 43596425 43599445 ECH
Gma19g01432 19 43596425 43599445 Gma03g01366 03 39849788 39851797 GST