Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01406 ATGTCTGTGATAGGGGCGTATTCACATTTTCTCTACGGAGAGGTTTATCAGAAGGATCAACAGTGCCCACAGTACTTGGTGAGTGGGAGGGGATATTTGTTTTCTCACAAGAGTAGTTGTGGGAGCATATGGGTTGGAAGCAGAAAGAGTGAAGGTAAAATTAAAAGGAGGAATTTGCGTGTGGAAGCTATGTGGCCTGATTTGTCAAGACCGAATGAGTTAGAGATGGAAGAGATTAGTGATTCTGAGCAGCTTGATCAAATTCTTGTTCATGCCCAACAGAACTCACAGCCTATCCTCATTGATTGGATGGCTACTTGGTGCCGGAAATGCATCTATTTGAAGCCCAAGTTGGAAAAATTAGCCCCTGAATATCACAACAAAGCCAAATTTTATTTCGTGGATGTGAATAAAGTACCTCAGACTCTAGTCAAGCGTGGCAACATATCTCTGTGGAAAGATGGAGAGATGAAAGCAGAAGTCATTGGAGGCCATAAGGCCTGGCTAGTTATGGAAGAAGTCAGAGAAatgatccaaaagtatttatga 549 0.4135 MSVIGAYSHFLYGEVYQKDQQCPQYLVSGRGYLFSHKSSCGSIWVGSRKSEGKIKRRNLRVEAMWPDLSRPNELEMEEISDSEQLDQILVHAQQNSQPILIDWMATWCRKCIYLKPKLEKLAPEYHNKAKFYFVDVNKVPQTLVKRGNISLWKDGEMKAEVIGGHKAWLVMEEVREMIQKYL 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01406 182 Pfam Thioredoxin 93 165 IPR013766 -
Gma19g01406 182 Gene3D Glutaredoxin 72 181 - -
Gma19g01406 182 PANTHER THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC 1 181 IPR044253 GO:0009570
Gma19g01406 182 SUPERFAMILY Thioredoxin-like 75 181 IPR036249 -
Gma19g01406 182 CDD TRX_family 83 179 - -
Gma19g01406 182 PANTHER THIOREDOXIN-LIKE 3-1, CHLOROPLASTIC 1 181 - -
Gma19g01406 182 ProSiteProfiles Thioredoxin domain profile. 59 182 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01406 Gma-Chr19 43330740 43333327 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01406 - - gmx:100811965 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01406 19 43330740 43333327 Gma19g01406 19 43330740 43333327 ECH
Gma19g01406 19 43330740 43333327 Gma03g01341 03 39578246 39581014 GST