Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01398 ATGGAGAAGATGGAGCATTTCAGCCACATCCACCCTCTTCTGTTAAAGCAGGAAGACAGCAATTACAACAACCAAGTCCTTTGCTCAGGTTGTGAAAAACTAATTTCAGGTCCTGTCTTCTGCTGCGTCCAATGCAACTACGTCCTTCACAAAAAGTGCGCACAAATTGCACGCCATGTGAAACACCCATTTCACCCTCAACACCCCCTTGTTCTCCTTTCCACCACCCCTTATGAAGGACCATACATATGTGATTCCTGTAGAGGCCTCTTCATTAACTTCGTATACCATTGTTATCATTGCAACTATGACCTTGATGTCTCATGTGGTTCTCAGTTTAACCCTGATGATGGCCACAAGCATGAGTTTTTGTCTGTGACAAATCCACAATCTTTTGTTTGTTATGCTTGTGGCATGCATGCAAACGAGGGTCTTGCTTGCTTATGCACCATTTGTCAGATTTGGGTTCATTCTAGCTGCGCTGAATTGCCTCTTGCTATTAGAATAAAAGGTCATGACCACCCTTTGAAGCTCACTTATACCCTTCATGTTTATGGTTTCTGGGGTAACTTAACTTGTGGTGTTTGTAATGAAGCAATGAGTCCAGCTTTTGCGGGTTACTTTTGCTCAACATGCAAATTTGCCGTGCATTTGAAGTGCCCGCAACAATATTTAAGAGGAGAGTACGAAGATGAGGAATCATTCACAGGCTATGAAACTGAGGAATCTCAAGATATTGATTTTACTTTTAGTTTCTTTGGTCATGAACATTTGTTGAAGTTCACGGAGGAAGAGAGTGATGATGATGTGAAATATTTTGATAAACTCTGTGATGCGTGTGTCCGACCCATCATGCCACCTTTCTTTTCCTGTGAAGAAGAAAATTGTGGCTTCTTTTTGCACCAAAGTTGTGCCGAATTACCAAGAACGAAGCAACACCCGTTTCACACGCACCCTCTAACTCTTCAATCCAAGGCTCCTTATGATGGCATTTACAAGTGCGACGGATGCAGAAGATTGAGCAATGGTTTTGTTTACCGTTGTGATGTGTGTCAATTCGACCTTGATGTTTGTTGTGGTACCCTTGAAGAGAGAATTGAACATGAAAGTCACGTGCATCCCTTGTTCCTCAAGAAGACAAGCGTTTCTAGGCAGTGCAAAGGTTGTCATCTTTGGTCGAAGCTTGTGTATGTGTGTGATGTTTGTGAGGATTTTTCTGTTGATTGTGGATGTGCTACTCTACCGAGTAAGACTTGGCACATGTATGACAAGCATCCTCTAAGTCTAAACTATTTCGTGGAAGGGAGTTTGAGGGAACATGAATGTGGCATTTGCAATGAGAAAATGTCTCCGAAGCAATGGTTTTATTATTGTGATGATTGTGACTCTGGTGCTCACCCTTCTTGTGTTGTTGGCAAGTCTAGGCGTGTGAAGTTTGGAGGCAGTTTCAAATATGATGTTCACTCACACCCTCTTGCTTTGGTTGAAGAAACTGAGCAGAACAATGAATGCGGAGCCTGTGGTGAACGCTGCAATGGATGGACACTTGAATGTGGCCAATGCAAAGGCTACTTTCACCGGGAAGGACAGTGTTTTTGGAAAGAATTTAAAAAGAGTGCAAAGTATTTGGAGTTATCAGGAATGATGAGACACAGGTATGCAGCAAACGTGTTGGCCTCCACGCCCAATGCTACCACAAACTGA 1704 0.4284 MEKMEHFSHIHPLLLKQEDSNYNNQVLCSGCEKLISGPVFCCVQCNYVLHKKCAQIARHVKHPFHPQHPLVLLSTTPYEGPYICDSCRGLFINFVYHCYHCNYDLDVSCGSQFNPDDGHKHEFLSVTNPQSFVCYACGMHANEGLACLCTICQIWVHSSCAELPLAIRIKGHDHPLKLTYTLHVYGFWGNLTCGVCNEAMSPAFAGYFCSTCKFAVHLKCPQQYLRGEYEDEESFTGYETEESQDIDFTFSFFGHEHLLKFTEEESDDDVKYFDKLCDACVRPIMPPFFSCEEENCGFFLHQSCAELPRTKQHPFHTHPLTLQSKAPYDGIYKCDGCRRLSNGFVYRCDVCQFDLDVCCGTLEERIEHESHVHPLFLKKTSVSRQCKGCHLWSKLVYVCDVCEDFSVDCGCATLPSKTWHMYDKHPLSLNYFVEGSLREHECGICNEKMSPKQWFYYCDDCDSGAHPSCVVGKSRRVKFGGSFKYDVHSHPLALVEETEQNNECGACGERCNGWTLECGQCKGYFHREGQCFWKEFKKSAKYLELSGMMRHRYAANVLASTPNATTN 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01398 567 Gene3D - 182 226 - -
Gma19g01398 567 SUPERFAMILY Cysteine-rich domain 31 110 IPR046349 -
Gma19g01398 567 ProSitePatterns Zinc finger PHD-type signature. 98 196 IPR019786 -
Gma19g01398 567 SUPERFAMILY Cysteine-rich domain 391 474 IPR046349 -
Gma19g01398 567 SUPERFAMILY Cysteine-rich domain 144 221 IPR046349 -
Gma19g01398 567 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 8 531 - -
Gma19g01398 567 SMART PHD_3 276 338 IPR001965 -
Gma19g01398 567 SMART PHD_3 441 489 IPR001965 -
Gma19g01398 567 SMART PHD_3 27 88 IPR001965 -
Gma19g01398 567 SMART PHD_3 133 213 IPR001965 -
Gma19g01398 567 SUPERFAMILY Cysteine-rich domain 289 373 IPR046349 -
Gma19g01398 567 Coils Coil 565 567 - -
Gma19g01398 567 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 8 531 - -
Gma19g01398 567 Pfam C1 domain 7 54 IPR004146 -
Gma19g01398 567 Pfam C1 domain 254 305 IPR004146 -
Gma19g01398 567 Pfam C1 domain 63 109 IPR004146 -
Gma19g01398 567 Pfam C1 domain 314 359 IPR004146 -
Gma19g01398 567 Pfam C1 domain 171 220 IPR004146 -
Gma19g01398 567 ProSitePatterns Zinc finger PHD-type signature. 28 101 IPR019786 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01398 Gma-Chr19 43256269 43258182 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01398 - - gmx:121174110 1259.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01398 19 43256269 43258182 Gma03g01333 03 39495089 39496801 GST