Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01388 ATGGGTGACACTATGAAACGGGTGCCAATTGAAAAACCTCCATTTACTCTCAGCCAAATCAAGAAGGCTATTCCACCACACTTTTTCCAGCGTTCTGTTCTGCGCTCATTCTCATATCTCATTTATGACCTTACCATAGCCTTCTGCCTCTATTACATTGCCACCGATTACTTCCACAACCTTCCTCATCCTCTCACTTTCTTGGCATGGCCAATCTATTGGGCTGTGCAAGGATTCACCCTAGCTGGTCTTTGGGTCATTGCACATGACTGTGGCCACCATGCATTCAGAGATTACCAACTTCTTGATGATAACGTTGGCCTTGTTCTCCACTCTGCTCTATTAGTCCCATACTTTTCATGGAAATACAGCCATCGCCGTCACCACTCCAACACAGGCAAAAGGGCTTGCCTGGGTGGTTTATGTTTATGGATTTCCAATGCTTGTGGTCAATGGGTGTTGGTCACAATCTTGCAGCACACTCACGCTGCATTGCCGCACTACAATTTCTCTGAGTGGGACTGGCTCAGAGGAGCTTTAGCAACAGTAGTGGATAGAGATTATGGAATCCTGAATAAGGTTCTCCATAATATTACAGGCACACATGTGGTGCATCACTTGTTCTCCACAATGCCACATTATCATGCAATGGACGCTACAAAGGCAATAAAGCCCATTTTGGGAGAGTATTATCGGTTTGACGAGACCCCATTTGTCAAGGCAATGTGGAGAGAGGCAAGAGAGTGTATTTATGTGGAACCAGATACTGAGAACAAAGGTGTATTTTGGTACAACAATAAGTTGTGA 807 0.4486 MGDTMKRVPIEKPPFTLSQIKKAIPPHFFQRSVLRSFSYLIYDLTIAFCLYYIATDYFHNLPHPLTFLAWPIYWAVQGFTLAGLWVIAHDCGHHAFRDYQLLDDNVGLVLHSALLVPYFSWKYSHRRHHSNTGKRACLGGLCLWISNACGQWVLVTILQHTHAALPHYNFSEWDWLRGALATVVDRDYGILNKVLHNITGTHVVHHLFSTMPHYHAMDATKAIKPILGEYYRFDETPFVKAMWREARECIYVEPDTENKGVFWYNNKL 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01388 268 CDD Delta12-FADS-like 31 216 - -
Gma19g01388 268 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 5 134 - -
Gma19g01388 268 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 152 268 - -
Gma19g01388 268 Pfam Fatty acid desaturase 69 134 IPR005804 GO:0006629
Gma19g01388 268 Pfam Fatty acid desaturase 145 231 IPR005804 GO:0006629
Gma19g01388 268 PANTHER OLEATE HYDROXYLASE FAH12 5 134 - -
Gma19g01388 268 PANTHER OLEATE HYDROXYLASE FAH12 152 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01388 Gma-Chr19 43184362 43185353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01388 68 268 Lipid Metabolism Gene Families AT3G12120 55.556 2.82e-62 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01388 K10256 - gmx:100809290 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01388 19 43184362 43185353 Gma19g01388 19 43184362 43185353 ECH
Gma19g01388 19 43184362 43185353 Gma03g01326 03 39445261 39451804 GST