Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01363 ATGAGTTCTGTGAATAATCTTGGAACATTGTTGGCTCGTCTTACCTCTATGCTGAACACACGTTCACCTCTGATTCCATGTTTTCACACTCTTAGAACGGTTCCCGTTTCCCCCAAAAGAGAATGGCCAAAGCTATTTTCTTCTGTCAATTCCACTCTCCCCTTCTCGTCTGCGCCCAACTTCGACTTCAAGGCCTACATGCTCGACAAGATCAACACCGTTAACAGAGCATTGGACGCAGCCGTTGCGCTAAGAGAACCACGGAAGCTCCACGAAGCCATGCGCTACACCCTCCTCGCCGGCGGAAAGAGGATCCGCCCGGTGCTCTGCCTCGCCGCCTGCTCTCTCGTCGGCGGCAGCGAGGCCACCGCAATCCCCGCCGCGTGCGCCGTCGAGATGATCCACACCATGTCGCTCATCCACGACGACCTGCCCTGCATGGACAACGACGACCTCCGCCGTGGAAAGCCGACAAGCCACAAGATCTTCGGCGAACACGTGGCCGTCCTCGCCGGCGACGCGCTCCTCGCGCTCGCGTTCGAGCACGTGGCGGCGTCGACGGAGGGCGCGTATGCGGCGCGCGTGGTGCGCGCGATCGGGGAGTTGGCGAAATGCATCGGCGCGGAAGGCGTCATGGCGGGACAGGTGGTGGACGTGAATTCGGAAGGGTTGACGTTGTCGATGTCGGATGAAGTGGCAGTTTTGGAGAGGTTGGAGTTTATTCACGTGCACAAAACGGCGGTGGTTGAAGGTGCGGTTGTGATGGGGGCGATACTGGGGGGTGGGTCGGACGAGGAAATTGAGAGGTTAAGGATGTTTGGTAGGTGCATTGGGTTGTTGGGTCAGGTTGTGGATGATGTTCTGGATGTTACTAAATCGTCCGAGGAATTGGGAAAGACGGCGAAGAAGGACTTGGTGGCTGATAAACTCACGTACCCCAAGGTTTTGGGGATACATGAGTCGAAGGAGTTTGCTCATAAATTGGTGCATGATGCAAACAAAATGTTGGCTGGGTTTCATCCTCCAAAGGCTGCTCCCCTATTTGCTTTAACCAATTACATTGCTTACAGGCAAAATTAA 1080 0.5546 MSSVNNLGTLLARLTSMLNTRSPLIPCFHTLRTVPVSPKREWPKLFSSVNSTLPFSSAPNFDFKAYMLDKINTVNRALDAAVALREPRKLHEAMRYTLLAGGKRIRPVLCLAACSLVGGSEATAIPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTSHKIFGEHVAVLAGDALLALAFEHVAASTEGAYAARVVRAIGELAKCIGAEGVMAGQVVDVNSEGLTLSMSDEVAVLERLEFIHVHKTAVVEGAVVMGAILGGGSDEEIERLRMFGRCIGLLGQVVDDVLDVTKSSEELGKTAKKDLVADKLTYPKVLGIHESKEFAHKLVHDANKMLAGFHPPKAAPLFALTNYIAYRQN 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01363 359 ProSitePatterns Polyprenyl synthases signature 1. 139 155 IPR033749 -
Gma19g01363 359 SFLD Isoprenoid Synthase Type I 65 357 - -
Gma19g01363 359 CDD Trans_IPPS_HT 86 357 IPR000092 GO:0008299
Gma19g01363 359 SUPERFAMILY Terpenoid synthases 64 340 IPR008949 -
Gma19g01363 359 Gene3D Farnesyl Diphosphate Synthase 56 359 IPR008949 -
Gma19g01363 359 Pfam Polyprenyl synthetase 88 323 IPR000092 GO:0008299
Gma19g01363 359 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 57 359 - -
Gma19g01363 359 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE 7, CHLOROPLASTIC 57 359 - -
Gma19g01363 359 SFLD Polyprenyl Transferase Like 65 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01363 Gma-Chr19 42949237 42950316 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01363 K13789 - gmx:100798663 583.563