Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01285 ATGTCTCTTTTGCCTCGTCTTCATATCTTAGCTAGGCCTTTACTCTCCCCCTTCTGCCAGAATGGAGGTAGACAAATAATGAGCAGGATTGGCATGACTGCCTGCTCTCTTTCTTCTGCAGCTGAAGCTTCAGATTTTGAATGTGATGCGATCCATGATGATGTCAAAGCAGCAGAGAAAGATAATGCACTTTGCTTGGCTGTCTCGCAGCTTGCTAGCGAGTTTAGCAAGGAATCTATGTTATCTCTGCAGAAGATTTTTGGTGTACGCCGTGCTCATGTGATATCTACAGGCTCCTTGAAGCTTGATCTAGCTCTGGGAATTGGTGGACTACCAAAGGGCAGGATTGTGGAAATTTATGGACGAGAAGCAGCTGGTAAGACTACACTTGCAATTCAAATTATTAAAGAAGCTCAAAAGCTTGGAGGATATTGTGCATATCTTGATGTAGAAAATGCATTGGACTTCTCACTTATGGAATCGATGGGCATAGATACTGAAAACCTTCTTATATCACATCCTGATTGTGCTGAAAATTTGTTAAGCATGGTTGATACATTAACAAAAAGTGGTGCTGTAGATGTGATTGTGATTGACAGTGTTGCTGCCCTCGTCCCCAAATGTGAACTTGATCAATTAGGAGTTACCACTAATCGCGATTTACAATCACGAATGATGACTCAAGCACTGCGGAAGATTCACTATTCATTATCTCATTCTCAAACTCTCATTGTTTTCATTAATCAGATTAGATTGAGTCCAAAATCAGCCAAGGAATATGGATCTGTGGAAGAAGTCACTTGTGGTGGAAATGCCTTGAGATTCTATGCAGCTGTTCGTTTGAGACTTTCAAGAGTGAGATTGATCAAAACTGAGGATAAGGTAGAGGGTGTTATGATCTGTGCTCAAGTGGTAAAAAATAAACTAGCACCAGCAGCAACGAAAAGGGCTGAACTGGGTATCAAGTTTGGAAGAGGCTTTTGCCATGAGTCAGATGTCTTAGATTTGGCTTGTGAACATGGAATCTTTGTGAAACATGAGGGAAGCTACTTTATTGAAGGTAACAGTTTTGATAGTAGAGAAGCAGCTGAACTGTTTTTGGCTCAAAATCATGCTGTTTGTGACAAGGCAGCTGAAATGCAGAAGACTAAGGATAACAAATCTTCATTTGTTGTTGAAGATAATAGCTCCACTTTTGTCACTGGAGTGGAAAACTGA 1218 0.4072 MSLLPRLHILARPLLSPFCQNGGRQIMSRIGMTACSLSSAAEASDFECDAIHDDVKAAEKDNALCLAVSQLASEFSKESMLSLQKIFGVRRAHVISTGSLKLDLALGIGGLPKGRIVEIYGREAAGKTTLAIQIIKEAQKLGGYCAYLDVENALDFSLMESMGIDTENLLISHPDCAENLLSMVDTLTKSGAVDVIVIDSVAALVPKCELDQLGVTTNRDLQSRMMTQALRKIHYSLSHSQTLIVFINQIRLSPKSAKEYGSVEEVTCGGNALRFYAAVRLRLSRVRLIKTEDKVEGVMICAQVVKNKLAPAATKRAELGIKFGRGFCHESDVLDLACEHGIFVKHEGSYFIEGNSFDSREAAELFLAQNHAVCDKAAEMQKTKDNKSSFVVEDNSSTFVTGVEN 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01285 405 ProSiteProfiles RecA family profile 1. 91 250 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Gma19g01285 405 ProSiteProfiles RecA family profile 2. 260 332 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Gma19g01285 405 PRINTS RecA protein signature 183 212 IPR013765 GO:0003697|GO:0005524|GO:0006281
Gma19g01285 405 PRINTS RecA protein signature 269 297 IPR013765 GO:0003697|GO:0005524|GO:0006281
Gma19g01285 405 PRINTS RecA protein signature 221 250 IPR013765 GO:0003697|GO:0005524|GO:0006281
Gma19g01285 405 PRINTS RecA protein signature 303 332 IPR013765 GO:0003697|GO:0005524|GO:0006281
Gma19g01285 405 PRINTS RecA protein signature 149 178 IPR013765 GO:0003697|GO:0005524|GO:0006281
Gma19g01285 405 SMART AAA_5 113 293 IPR003593 -
Gma19g01285 405 PANTHER DNA REPAIR PROTEIN RECA HOMOLOG 2, MITOCHONDRIAL 16 380 - -
Gma19g01285 405 Gene3D - 90 394 IPR027417 -
Gma19g01285 405 ProSitePatterns recA signature. 272 280 IPR020584 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Gma19g01285 405 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 315 IPR027417 -
Gma19g01285 405 PANTHER RECA 16 380 IPR013765 GO:0003697|GO:0005524|GO:0006281
Gma19g01285 405 Pfam recA bacterial DNA recombination protein 63 327 IPR013765 GO:0003697|GO:0005524|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01285 Gma-Chr19 41953709 41961542 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01285 - - gmx:100777423 720.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01285 19 41953709 41961542 Gma03g01234 03 38217601 38229923 GST