Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01273 ATGGGGTCAGAAACCGAATTGAAGCTTCCAATTATTGACTTCTCCATTGAGTACTTGGAGTCCAATTCTGATCAGTGGGAATCAGTGAAATCCCAAGTTCACAAGGCCCTTGTAGAGTATGGTTGCTTTGAGGCTGTGTTTGATAAAGTCCCTTTGGACCTTCGAAAAGCCATTTTTCTTGAAGTGGAAGAGCTGTTTGATCTCCCTTTACAAACCAAACAACGAGTTGTGTCTAGTAAACCATACCATGGTTATGTTGGGCCTCTTCAACTCTATGAGAGCATGGGAATTGATGATGTAGATGTTCATGACAAAGTGGAAAGTTTAATCAAGATCTTATGGCCACAAGGAAAACCAGGTTTTAGCAAAAATCTACAATCCTTCACAGAGCAAGTGACAAGGTTGGATCAGATTATTAGGAAGATGATTTTAGAGAGTTTAGGTATTGAAAAATATATGGACGAGCACATGAACTCAACAAATTACCTTGCACGGCTTATGAAGTACCAAGGCCCTCAAACTAATGAAGCAAAAGTTGGCATAAGAGAGCACACGGATAAGAACATATTGACCACATTGTGTCAAAATCAAATTGATGGTTTAGAGGTACAGACCAAAAGTGGAGAGTGGATCAAATGCAAGCCCTCAACACCAAATAGTTTCGTTGTTGTCACCGGGGACACACTTTATGCATGGACAAATGGGAGGGTGCATACGCCGGCTCATCGAGTGATGATGAGTGGAAATGAGACAAGGTTCTCTATTGGATTGTTTACAGTTCCAAAACCAGGGTTCATAATAAAGGCTCCAGATGAGCTTGTGACAGAGGAGCACCCTTTGCTTTTCAAGCCCTTTGTCCAGAGTGAGTTCATGAAGTTTCTTCGCTCTTCTGAGAGTACCAAAAATGCCCTGAAGGTTTATTGTGGAGTCTGA 933 0.4159 MGSETELKLPIIDFSIEYLESNSDQWESVKSQVHKALVEYGCFEAVFDKVPLDLRKAIFLEVEELFDLPLQTKQRVVSSKPYHGYVGPLQLYESMGIDDVDVHDKVESLIKILWPQGKPGFSKNLQSFTEQVTRLDQIIRKMILESLGIEKYMDEHMNSTNYLARLMKYQGPQTNEAKVGIREHTDKNILTTLCQNQIDGLEVQTKSGEWIKCKPSTPNSFVVVTGDTLYAWTNGRVHTPAHRVMMSGNETRFSIGLFTVPKPGFIIKAPDELVTEEHPLLFKPFVQSEFMKFLRSSESTKNALKVYCGV 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01273 310 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 160 261 IPR005123 -
Gma19g01273 310 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 4 309 - -
Gma19g01273 310 Gene3D - 1 299 IPR027443 -
Gma19g01273 310 SUPERFAMILY Clavaminate synthase-like 6 295 - -
Gma19g01273 310 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 309 - -
Gma19g01273 310 Pfam 2OG-Fe(II) oxygenase superfamily 156 259 IPR044861 -
Gma19g01273 310 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 88 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01273 Gma-Chr19 41835823 41838249 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01273 3 290 Glycosyltransferase AT5G59530 23.684 3.03e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01273 - - gmx:100817152 628.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01273 19 41835823 41838249 Gma03g01219 03 38053541 38056124 GST