Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01215 ATGGATTCGCCGTGTCTCTCCAACGATTCGGTTTCTGGATTCAAAGACAAGGAGTCAATGGTTGACCCCTTTTTGGTCGAGGCTCTCCAGAACCCTCGTCACCGCCTCACCATTTTGAGGATGGAGCTGGAGATCCAGAAGTTTTTGAATAATGCTGATCAGCTGCATTTTGAGTTTCATCATTTCCCTTCTTCCTATCTCCGACTGGCTGCACACCGTGTTGCTCAACACTACAACATGCAAACAATGGTTCAAGATAATGGCTTAGATGGCCAGGGAAGTAAAATTCTGGTTAGGAAGTTACCTGAAAGCAAGTACCCTGTAGTTCGATTATCCGAAATACCTGCTAAGCAGTTGGAAAATGATAAATCTGAGCAGAAAAAAATTGTTATTAGACCTAGGCCTAATAAAAACAGTTTGAATGATGCTAACGGAGTTGGGAGGAAAGGAAACCCTTTAAGAAGTGTGGAAGAAAGGAAGGAGGAATATGACCGGGCACGGGCACGTATCTTTAGTAGCCCTAGAAGCTCTGAATCAGGTGATACCTCATCCGTGGTTCCAATGGATGGGAGATATTCTTCTACTAGCAAGGATGAGAATGAAACTAGCAAGAACCCCATGGCTGATTCAGAAAGATATATCAGTACCAGGGATAGTTGTTCGACTCGAGTTGCCATACTCAGAGATAGGGAAAAGGATCGTAGTGATCCAGATTATGACCGTAGTTATGGAAGGTATGCTAGGAGTATCCCAACCTCTGCTGTTAACTTGGTGCCATTTAACTTGCAAAAAGCTCAACCTTCATTTGCTCAATATGATGCTACGTTTAATCAGTTAGGTCAGATGTCACAAACTCAGGCCTCACTTGGCTATATACCTCCTTCAACCCCGATAATGGGTCCTTTTGGCACCACAGGATTAAATCAGACATCTAGTGAGGGTGTTTACCTACAGTGGCCTAGTGCTGCAATGATGTATGCACATTCATACGACCAATTTAGACATGCTGTTTTCCAGGCTCCATTTGGTCAACAGCCGTTGAGCTTTGACTATTCACAGAACTATTAG 1068 0.4363 MDSPCLSNDSVSGFKDKESMVDPFLVEALQNPRHRLTILRMELEIQKFLNNADQLHFEFHHFPSSYLRLAAHRVAQHYNMQTMVQDNGLDGQGSKILVRKLPESKYPVVRLSEIPAKQLENDKSEQKKIVIRPRPNKNSLNDANGVGRKGNPLRSVEERKEEYDRARARIFSSPRSSESGDTSSVVPMDGRYSSTSKDENETSKNPMADSERYISTRDSCSTRVAILRDREKDRSDPDYDRSYGRYARSIPTSAVNLVPFNLQKAQPSFAQYDATFNQLGQMSQTQASLGYIPPSTPIMGPFGTTGLNQTSSEGVYLQWPSAAMMYAHSYDQFRHAVFQAPFGQQPLSFDYSQNY 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01215 355 CDD R3H_encore_like 34 100 - -
Gma19g01215 355 SMART R3H_4 19 101 IPR001374 GO:0003676
Gma19g01215 355 PANTHER OS05G0411600 PROTEIN 8 354 - -
Gma19g01215 355 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN 8 354 - -
Gma19g01215 355 MobiDBLite consensus disorder prediction 172 193 - -
Gma19g01215 355 Gene3D - 11 135 IPR036867 GO:0003676
Gma19g01215 355 Pfam SUZ domain 125 173 IPR024771 -
Gma19g01215 355 SUPERFAMILY R3H domain 8 123 IPR036867 GO:0003676
Gma19g01215 355 MobiDBLite consensus disorder prediction 152 171 - -
Gma19g01215 355 Pfam R3H domain 37 88 IPR001374 GO:0003676
Gma19g01215 355 ProSiteProfiles SUZ domain profile. 105 175 IPR024771 -
Gma19g01215 355 MobiDBLite consensus disorder prediction 119 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01215 Gma-Chr19 40922459 40926333 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01215 - - gmx:100796710 716.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01215 19 40922459 40926333 Gma19g01215 19 40922459 40926333 ECH
Gma19g01215 19 40922459 40926333 Gma03g01158 03 37038456 37042512 GST