Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01206 ATGGTGAATCCGGGATTGTTTTCTGCGAATAAGTCTACGAATTCGGTGAAAGTAAGCTTTCGGATACCGTATTTCACCCAATGGGGTCAGAGCTTGCTGGTGTGTGGCTCTGTACCAGTTCTTGGTTCCTGGAATGTGAAGAAGGGTGTGTTGCTCAGCCCCGTTCATCAAGGGGCTGAGCTCATATGGGGTGGAAGTATCACTGTGCCAAAAGGGTTCCAATGCCAGTACAGCTATTATGTTGTAGATGATAACAAAAATGTACTGAGATGGGAGATGGGGAAGAAGCGTGAACTGGTACTCCGTGAAGGGATTCAGAGTGGCCAGGAGATTGAGTTCCGTGATCTTTGGCAGACTGGCTCAGATGCACTTCCTTTCAGAAGTGCTTTCAAAGATGTCATTTTTCGGCAAAGCTGGGACTTGAGCGATGCAACCGTAGGAGTAAACCACATTAATGTTGAACCGGAAGGAGAAGCTATCTTGGTCCAATTCAAAATTTCCTGCCCAAATATTGAGAAAGACACATCAATATATGTCATTGGCAGCAATACAAAGTTGGGGCAGTGGAAAGTTGAAAATGGACTAAAACTCAGCTATTTTGGTGAATCTGTCTGGAAAGCTGAATGTGTGATGCAAAGGATACTCTTATCAAGCTTTATATTCGTCCTTAACAGCAATTCCACATATAGATATGGAAAATATGACAGGAGTGGGAACTTTTCTATAGAGAGTGGTCCAAATCGAGAAGTCTATGCTAACTCCCCAAGGAATGAGGCGAAATATATTTTTCTTTCAGATGGCATGATGCGGGAAATACCTTGGCGTGGTGCTGGTGTAGCAGTCCCCATGTTTTCTGTTAGGTCAGAATCTGATCTGGGTGTTGGGGAGTTTCTTGACCTTAAGTTGCTAGTTGACTGGGCTGTAGCATCTGGTTTCCATTTAGTTCAACTTTTACCAATCAATGATACATCTGTGCATGGGATGTGGTGGGATTCTTATCCATACAGTTCACTCTCAGTCTTTGCATTGCATCCATTGTACCTGAGAGTACAGGCACTTTCTAAGAACATACCCGAGGAGATCAAGAAAGAGATTGAAAAGGCAAAACAGCAATTGGATGGGAAGGATGTTGATTATGAGGCTACAATGGCTACTAAACTCTCAATTGCTAAGAAAGTTTTCGCTCAAGAGAAAGATTTGATACTTAATTCAAGTTCCTTTAAGGAGTTCTTTTCTGAGAATGAGGGTTGGTTGAAACCTTATGCTGCTTTCTGTTTCCTGCGGGACTTCTTTGAAACATCAGATCGCACTCAATGGGGTTGTTTTGCTCATTACTCAGAGGATAAGCTAGAGAAACTTGTATCCAAGGACAGCCTGCATTATGAGATAATTTGCTTCCACTACTATGTTCAATACCATTTACATTTACAATTATCAGAAGCTGCAGAATATGCAAGAAAGAAGGGAGTGATACTAAAGGGAGATCTTCCTATTGGAGTTGACAGAAACAGTGTGGATACCTGGGTTTATCCAAATTTGTTTCGAATGAACACTTCTACTGGGGCACCTCCAGATTATTTTGATAAAAATGGCCAGAATTGGGGTTTCCCTACTTATAATTGGGAAGAAATGTCAAAGGACAACTATGGTTGGTGGAGAGCTCGATTGACACAGATGGCAAAATATTTTACAGCTTACAGGATTGATCACATTTTGGGATTCTTCCGAATTTGGGAACTTCCGGATCATGCTGCGACAGGTCTTGTTGGAAAATTCCGACCATCTATTCCTCTTAGTCAGGAAGAACTTGAACGAGAAGGAATATGGGACTTTAATCGCCTAAGTTACCCATATATTAAGCGGGAACTATTACAGGAAAAATTTGGTGATGCTTGGACTTTTGTTGCAACAACTTTTCTAAAGGAAATTGACAAGAACTTCTATGAGTTCAAGGAGGATTGCAACACAGAGAAAAAAATTGCTTCCAAACTGAAAACTTGTGCAGAAAGTTCTCTCTTGTTGGAGAGTGTAGACAAATTGCAGCGTAATCTCTTTGATCTTTCACAGAATATAGTTCTAATCCGAGATCCAGAGGATCCAAGAAAATTTTATCCTCGTTTCAACCTTGAAGATACCATAAGTTTCCAGGATTTGGATGATCATAGCAAGAATGTTCTCAAACGATTATACCATGACTACTATTTCTGTCGTCAAGAGAATCTTTGGAGGCAAAATGCATTGAAGACCCTGCCTGTACTTCTAAATTCATCAGACATGCTGGCCTGTGGGGAAGATTTGGGTCTCATTCCATCTTGTGTCCATCCTGTTATGCAAGAACTGGGATTAGTTGGGTTGCGCATTCAGCGCATGCCCAATGAACCTGATCTGGAATTTGGTATTCCTTCTAAGTACAGCTACATGACGGTATGTGCCCCTTCATGTCATGACTGTTCCACCTTGCGTGCTTGGTGGGAAGAAGATGAAGAAAGAAGACTCCGGTTTTTCAAGAATGTGATGGAGTCCGATGGGTTGCCGCCCGATCAATGTGTTCCAGAAGTTGCACATTTTGTTATAAGGCAGCATTTTGAAGCCCCATCAATGTGGGCAATCTTCCCTCTTCAGGACTTGCTAGCATTAAAAGAAGAATATACAACACGCCCTGCAACAGAGGAGACAATCAATGACCCTACGAATCCGAAGCACTATTGGAGATTCCGTGTGCATGTGACTTTGGAATCATTGATCAAGGATAATGACCTCCAAACCACCATCAAAGATCTCGTCAGTTGGAGTGGAAGATCACTCCCTAAGGAAGACGACTCAGAAATAGAAGCGAGCCCAGTGTCGGTGTTGTCAGCAGCAGAAGCTCTTTCTGAGAAGCAGAAGTTTGCCAGTACCACGGAAAAGCCTGTTCTTGTCAAATAA 2925 0.4222 MVNPGLFSANKSTNSVKVSFRIPYFTQWGQSLLVCGSVPVLGSWNVKKGVLLSPVHQGAELIWGGSITVPKGFQCQYSYYVVDDNKNVLRWEMGKKRELVLREGIQSGQEIEFRDLWQTGSDALPFRSAFKDVIFRQSWDLSDATVGVNHINVEPEGEAILVQFKISCPNIEKDTSIYVIGSNTKLGQWKVENGLKLSYFGESVWKAECVMQRILLSSFIFVLNSNSTYRYGKYDRSGNFSIESGPNREVYANSPRNEAKYIFLSDGMMREIPWRGAGVAVPMFSVRSESDLGVGEFLDLKLLVDWAVASGFHLVQLLPINDTSVHGMWWDSYPYSSLSVFALHPLYLRVQALSKNIPEEIKKEIEKAKQQLDGKDVDYEATMATKLSIAKKVFAQEKDLILNSSSFKEFFSENEGWLKPYAAFCFLRDFFETSDRTQWGCFAHYSEDKLEKLVSKDSLHYEIICFHYYVQYHLHLQLSEAAEYARKKGVILKGDLPIGVDRNSVDTWVYPNLFRMNTSTGAPPDYFDKNGQNWGFPTYNWEEMSKDNYGWWRARLTQMAKYFTAYRIDHILGFFRIWELPDHAATGLVGKFRPSIPLSQEELEREGIWDFNRLSYPYIKRELLQEKFGDAWTFVATTFLKEIDKNFYEFKEDCNTEKKIASKLKTCAESSLLLESVDKLQRNLFDLSQNIVLIRDPEDPRKFYPRFNLEDTISFQDLDDHSKNVLKRLYHDYYFCRQENLWRQNALKTLPVLLNSSDMLACGEDLGLIPSCVHPVMQELGLVGLRIQRMPNEPDLEFGIPSKYSYMTVCAPSCHDCSTLRAWWEEDEERRLRFFKNVMESDGLPPDQCVPEVAHFVIRQHFEAPSMWAIFPLQDLLALKEEYTTRPATEETINDPTNPKHYWRFRVHVTLESLIKDNDLQTTIKDLVSWSGRSLPKEDDSEIEASPVSVLSAAEALSEKQKFASTTEKPVLVK 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01206 974 Pfam 4-alpha-glucanotransferase 281 909 IPR003385 GO:0004134|GO:0005975
Gma19g01206 974 SUPERFAMILY (Trans)glycosidases 274 927 IPR017853 -
Gma19g01206 974 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 10 119 IPR002044 GO:2001070
Gma19g01206 974 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 154 276 IPR002044 GO:2001070
Gma19g01206 974 Gene3D Glycosidases 729 934 - -
Gma19g01206 974 Gene3D Glycosidases 274 604 - -
Gma19g01206 974 SMART CBM_20_2 15 111 IPR002044 GO:2001070
Gma19g01206 974 SMART CBM_20_2 159 261 IPR002044 GO:2001070
Gma19g01206 974 Gene3D Immunoglobulins 7 119 IPR013783 -
Gma19g01206 974 Gene3D Immunoglobulins 153 263 IPR013783 -
Gma19g01206 974 SUPERFAMILY Starch-binding domain-like 158 254 IPR013784 GO:0030246
Gma19g01206 974 SUPERFAMILY Starch-binding domain-like 13 117 IPR013784 GO:0030246
Gma19g01206 974 CDD CBM20_DPE2_repeat1 17 117 IPR034840 GO:2001070
Gma19g01206 974 Pfam Starch binding domain 16 107 IPR002044 GO:2001070
Gma19g01206 974 Pfam Starch binding domain 160 256 IPR002044 GO:2001070
Gma19g01206 974 PANTHER - 12 934 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01206 Gma-Chr19 40775629 40787242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01206 16 936 Glycoside Hydrolase AT2G40840 73.102 0.0 1439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01206 K00705 - gmx:100793021 1956.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01206 19 40775629 40787242 Gma19g01206 19 40775629 40787242 ECH
Gma19g01206 19 40775629 40787242 Gma03g01143 03 36702233 36714416 GST