Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01203 ATGTCGCGGCTGGAGCGGCCGCACAGGACGGAGCGGCGCGGGTTCTGGATCGGTTTTTTGCGCCGCTACTTCGAAGCACCCTCCCCTTTTCCTCCTCCTCCGCCACCCTCCGTCCTCCTCCCCCTCACGTGCCGCCGTGGCGGCTTCATCCCTTCCTGCCTCTCCGACGACGCTGTCTCCACGTGCAACTTCGACCGTGGCTTCACCGTGATCGTCGCCATCCTCCACCGCATCGAGCCCCTCGACAACTCCGCCATCTCGAAAGGTGTGTCCCCCGCCGCCAGAGACTCCGCGAAGCAGACCATTTCCACCATGCTTGGATTGTTCCCCTCCGACCACTTTTCTGTCATCGACACTGTCTCCAAACACCCCCTCCACCGCCTCCTCTTCTCCTCCCACAGGACGAGAGGAGACAACTCCAATAATGAAAGACAGGACTCTGGTTATGGGGGCAGATGGGGTTCTAATAATACAAAGGATTCTGATGATGGTTTAAGCAATTTTCCAGGGGCCAAGGTTCAGAATTCTCCTGGAAGAGAAGCTTTTCCTGGTGGTTGGGGTGGTGGTGGAAGCGGTGGAGGTGGAGCTAGTAACAGTGACAATGGTGGCTGGGAACAAGCAAGTGGTGGTGCTGGTCCAAGTGATGGTGAACAAGGAAGCTCTGGCTGGGGATCTGCCACAAAGAAAGCAGCATCTGGGAACGGATGGGGGTCTGGAAATTCTGGCGGTGGGGAGCAATTTCCATTCCTGAAACCCGAGCATATTTGTATGCACCCGACGAGCGAACAGATAAGTTATAAAGGGATGCAGTTCCCGTTGAGAATGACCCAAGAGGAGCTTCTTGCGCAACACCTCGAACAGCAAAAGATCCATgatggtgaacctgttgtcgaggatgatgatgatgaggaagaggatgatgatgatgatgatgatgaggatgatgaccatgccgaagGACTAGAAGGTGATGCATCTGGTAGGTCGAAGCAGACCAGAAGTGAAAAGAAGAGTCGCAAGGCAATGCTTAAACTTGGAATGAAACCTGTCACAGGTGTCAGCCGAGTGACAGTCAAGAAGAGCAAGAATATCCTGTTCGTTATCTCAAAACCAGATGTTTTCAAGAGTCCAACATCTGAAACTTACATTATATTTGGGGAAGCCAAGATTGAAGACTTGAGCTCACAGTTACAAACTCAGGCGGCAGAGCAATTCAAGGCTCCTAATTTGAGCAATGTTGGATTGAAGCCCGAATCTTCTGCTGTTGCTCAAGATGATGAGGAAGTGGATGAGGCTGGCGTAGATCCCAAGGACATAGAGTTGGTGATGACTCAAGCTGGTGTGTCAAGGCCTAAAGCTGTTAAAGCTCTCAAGGCGGCCAGTGGCGACATTGTTGCTGCCATTATGGAGCTAACTAATTAA 1422 0.493 MSRLERPHRTERRGFWIGFLRRYFEAPSPFPPPPPPSVLLPLTCRRGGFIPSCLSDDAVSTCNFDRGFTVIVAILHRIEPLDNSAISKGVSPAARDSAKQTISTMLGLFPSDHFSVIDTVSKHPLHRLLFSSHRTRGDNSNNERQDSGYGGRWGSNNTKDSDDGLSNFPGAKVQNSPGREAFPGGWGGGGSGGGGASNSDNGGWEQASGGAGPSDGEQGSSGWGSATKKAASGNGWGSGNSGGGEQFPFLKPEHICMHPTSEQISYKGMQFPLRMTQEELLAQHLEQQKIHDGEPVVEDDDDEEEDDDDDDDEDDDHAEGLEGDASGRSKQTRSEKKSRKAMLKLGMKPVTGVSRVTVKKSKNILFVISKPDVFKSPTSETYIIFGEAKIEDLSSQLQTQAAEQFKAPNLSNVGLKPESSAVAQDDEEVDEAGVDPKDIELVMTQAGVSRPKAVKALKAASGDIVAAIMELTN 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01203 473 PANTHER NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 276 473 - -
Gma19g01203 473 MobiDBLite consensus disorder prediction 321 342 - -
Gma19g01203 473 MobiDBLite consensus disorder prediction 288 343 - -
Gma19g01203 473 MobiDBLite consensus disorder prediction 213 241 - -
Gma19g01203 473 Gene3D - 434 471 - -
Gma19g01203 473 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 276 473 IPR016641 GO:0005854
Gma19g01203 473 Pfam Protein of unknown function (DUF760) 75 132 IPR008479 -
Gma19g01203 473 CDD UBA_NACA_NACP1 427 472 - -
Gma19g01203 473 MobiDBLite consensus disorder prediction 296 320 - -
Gma19g01203 473 MobiDBLite consensus disorder prediction 142 173 - -
Gma19g01203 473 MobiDBLite consensus disorder prediction 133 247 - -
Gma19g01203 473 Gene3D - 341 394 IPR038187 -
Gma19g01203 473 Pfam NAC domain 335 390 IPR002715 -
Gma19g01203 473 ProSiteProfiles NAC A/B domain profile. 332 397 IPR002715 -
Gma19g01203 473 SMART NAC_2 335 391 IPR002715 -
Gma19g01203 473 Pfam HYPK UBA domain 434 472 IPR044034 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01203 Gma-Chr19 40734676 40748081 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01203 K03626 - gmx:100791446 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01203 19 40734676 40748081 Gma19g01203 19 40734676 40748081 ECH
Gma19g01203 19 40734676 40748081 Gma03g01141 03 36672533 36674847 GST