Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01200 ATGAGCCTCTCGTGCATCCTCAAACACAGGATCTTCCCTCCACCCCCTTCCCCCTTCACCCTCTTCATCCAACGGCGATGGAAGAAACCCACCGTCTCCGCCCAAACCCGCTTAGAGGACAGAGTCCGAGACCCCCACTTGGACAAACTCATGTCCCACCTCAAAAGACTCGACCTTGTTCTCAGAATCCACCACCTCATGTCCGCGCGCAAGCGCGGTCCCTTCGTCTCCCTCACCCTCCTCTCCCGCTGGCGAAACATCCTCGGACTCCACATCCCCGTGGGGCTCTTCCTCCGCAAATACCCCCACGTGTTCCTCGTGTTCGTCCACCCTTTTAGAAAAAACACGTGCTGCAGGATCACCAAAAGGATGAAAGAGTTGATCTTGCTCGAAGGGCTGGTGGTTAAGCAGCAAGAAACGGAGGCTGTGAAGAGGGTAAAGAAGCTGTTAATGATGTCATTGAATGGCACTCTTCGTTTGCACGCCTTGAGGTTGTTCAAGAGAGAATTGGGTCTCCCTGAGGATTTCAGAGACTCCATTCTTGGCAAGTATAGTGCGGATTTCAGATTGGTTGATTTAGAGGTTGTGGCGTTGGTTGATTGGGACGCCGAATTGGCGGTGGCTCGGGTTGAGGAATGGAGGGAGAAGGAGTACTCTGAGAAGTGGTTGAGTGAGTTTGAGACCAAGTTCGCGTTCCCCGTTAGTTTCCCAACTGGGTTTAAGTTCGAGAGAGGGTTTAAAGAGAGGTTGAAGAATTGGCAGAGGCTTCCTTACGCCAAGCCTTACGAGAGGAAAGAGGTTGTTCGGGTGAGGACGTGTGGAGGAATCGAACGGTACGAGAAGAGGGCTGTGGCTGTTCTTCATGAGCTGTTGAGTTTGACTGTGGAGAAGATGGTCGAGGTTGATCAGCTGGCTCATTTTCGGAGGGACTTTGGTGTCGAAGTTAATGTGCGTGAATTGCTGCTGAGGCACCCTGGTATATTTTACTTATCTACTAAAGGGAAGACTCTAACTGTTTTTCTTAGGGAAGCTTATAGGAAAGGGGGGTTGGTTGAGCCAAATCCCGTGTATGAGACGCGTAGGAATATGTTGGATCTTGTGTTGTTAGGGTGTAGGAAAACCAAACTATTGTTAGATTGTGATGAGTCTAATAAGGAAGAGAGTAATGTTGTAGCCTGTGAAGTAAATGAGGAAGGTGAAAGACAAGGAGATTGGGTGATTCCTTTCTTGGAGAAATGTGAGGAGAATAGATCCCCTTGA 1260 0.4968 MSLSCILKHRIFPPPPSPFTLFIQRRWKKPTVSAQTRLEDRVRDPHLDKLMSHLKRLDLVLRIHHLMSARKRGPFVSLTLLSRWRNILGLHIPVGLFLRKYPHVFLVFVHPFRKNTCCRITKRMKELILLEGLVVKQQETEAVKRVKKLLMMSLNGTLRLHALRLFKRELGLPEDFRDSILGKYSADFRLVDLEVVALVDWDAELAVARVEEWREKEYSEKWLSEFETKFAFPVSFPTGFKFERGFKERLKNWQRLPYAKPYERKEVVRVRTCGGIERYEKRAVAVLHELLSLTVEKMVEVDQLAHFRRDFGVEVNVRELLLRHPGIFYLSTKGKTLTVFLREAYRKGGLVEPNPVYETRRNMLDLVLLGCRKTKLLLDCDESNKEESNVVACEVNEEGERQGDWVIPFLEKCEENRSP 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01200 419 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN 17 416 - -
Gma19g01200 419 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 17 416 IPR045040 GO:0003723
Gma19g01200 419 Pfam Plant organelle RNA recognition domain 42 371 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01200 Gma-Chr19 40676902 40678161 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01200 - - gmx:100789857 847.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01200 19 40676902 40678161 Gma19g01200 19 40676902 40678161 ECH
Gma19g01200 19 40676902 40678161 Gma03g01137 03 36598432 36599199 GST