Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01173 ATGAAAGTTCTTTGTAGTGAATCATTTCCTTGCCCATCGGGTGGTGTTGGCATCTCAAATCCTGGTTCTTGGGGCATGAATATTGAGAAAGGGCAGAAGTACCAAATAGTCTTCTATGCTAAAGCAGATGGTGCAATTAATCTAGACGTTTCATTTGTTGGATCGGAGAAAGAGCTTATGGACATAATGTTACAAATTGGACAAGGATGGAGACTATATATGGTAGAAGCCAATGCTACAAATCATAATGCAAGTCTTCAAATAACAACAAGCAAGGGTGGAGTTGTGTGGTTAGACCAACAGTTAGCTGAGGATCTTGGTGCATTGCCAGTTTTGCTAGAGGTTCGCCCGAATCAAGATGGGGGAGCTCTTAGGGCTTCCATGGGGCATCCTAAGCCATTTGACTTGAGAATTGTTACAATTGGAAATGAAGATTGTGGCAAGTTTAACTACAAAGAGCAAACTTCAACCTTAATTGTAGATGCTAAAGGATCAGTGAGAAAAATTCCAGATACTTTCTTTGGAGCATTTTTTGAGGAAATCAATCATGCAGGAGCTGGGGGATTGTGGGCTGAGCTTGTGAGGAATAGAGGTTTTGAAGCTGGAGGCCCCAACGTTCCCTCAAATATTTTTCCGTGGTCAATTATTGGAGATGATTCAACCATCCTTGTCTCAACTGATCGTACCTCTTGCTTTGAGCGAAATAAAGTCGCATTGCGTATGAACATTCTTTGTAATGAATCTAATCCTTGCCCAGCTGGTGGTGTTGGTATCTCAAATCCTGGTTTCTGGGGCATGAATATTGAGAAAGGGCAGAAGTACAAAGTAGTCTTCTATGTGAAAGCACGAGGTAGACTTGATCTAGACGTTTCATTTGTTGGATCGGTTAGTGGTGCAAAGTTGGCTTCACAAAACTTTAGAGCTCCTGGACAAAATATTTCAATGTGGACAAGGATGGAGACTATACTGGAAGCCAATGATACAAATCGTAATGCAAGTCTTCAAATAACAACAAGCAATAGAGGAGTTGTATGGTTAGACCAAGTGTCTGCTATGCCCTTAGACACATTTAAGGGTCATGGTTATCGAAAGGACCTTTTTCAAATGGTGGCAGATTTGAAACCAAATTTTTTCAGATTTCCGGGTGGGTGTTATGTTGAAGGAAATTATCTAAGAAATGCATTTAGGTGGAAAGACACGGTTGGACCCTGGGAAGAGAGACCAGGGCACTTTAATGATGTATGGAATTATTGGACTGACGATGGATTTGGTTTTTTTGAGGGCCTCCAATTCGCTGAGGATGTTGGTGCATTGCCAACGTGGGTGTTTAACAATGGTCTCAGCCTTAACGACGAAGTTAATACATCTGCCATCGCGCCTTTTATCCAAGAAGCTCTAGACGGAATCGAGTTTGCTAGAGGTTCTCCAAAATCACAATGGGGATCTCTTAGGGCTTCCATGGGACATCCTGAGCCATTTGACTTGAGAATTGTTGCCATTGGAAATGAAGAGTGTGGCATGCCTAAGTATCAAGCGAACTATCTCAAATTTCACGCTGCCATAAAACAAGCTTATCCAGATATTCAGATCATAACCAATTGTGATGGTTCTAAAAAACCATTAGATCATCCAGCTGATCTCTATGATTTTCATATTTATACAAATGCTACGGACATGTTTTCAAAGTCTACCAAGTTCGATGATGCACCACGATCTGGTCCAAAGGCGTTTGTTAGCGAGTATGCTGTTTGGAAGGATGATGCTGGAAATGGAACTCTTTTGGCTGCCGTGGCTGAAGCTGCATTCCTTATTGGACTAGAAAGAAATAGTGATGTCGTTCACATGGTCAGTTATGCGCCACTCTTTGTAAACACAAATGATAGAAAGTGGACACCGGATGCAATTGTATTTGACTCTCATCAGCATTATGGAACTCCTAGTTATTGGGTTCAACATCTTTTTACTACTTCAAGTGGAGCCACTTTGCTTAATACAACACTTCAAACTTCTACCGACTCCCTTGTTGCATCAGCAATTGAATACACAAACCCTAAGGATAAGAAGAACTACTTGAGAATAAAGGTTGTAAACTTTGGAAGTGATCAACAGAACTTGAGATTTTCTATAAGTGGACTGACTTCAAATGTGCAGCAATCTGGAGCAGCAAAGACAGTGCTCACGGGGCCTAATGTAAAAGAAGAGAATTCCTTCTCAGAACCAAATAAGATTGCGCCACAACACTCTTCACTTGAGGATGCTAGTGGGGACATGAACGTTGTACTTGCTCCATATTCTGTTACATCATTTGATCTATTAAAGTAG 2322 0.4117 MKVLCSESFPCPSGGVGISNPGSWGMNIEKGQKYQIVFYAKADGAINLDVSFVGSEKELMDIMLQIGQGWRLYMVEANATNHNASLQITTSKGGVVWLDQQLAEDLGALPVLLEVRPNQDGGALRASMGHPKPFDLRIVTIGNEDCGKFNYKEQTSTLIVDAKGSVRKIPDTFFGAFFEEINHAGAGGLWAELVRNRGFEAGGPNVPSNIFPWSIIGDDSTILVSTDRTSCFERNKVALRMNILCNESNPCPAGGVGISNPGFWGMNIEKGQKYKVVFYVKARGRLDLDVSFVGSVSGAKLASQNFRAPGQNISMWTRMETILEANDTNRNASLQITTSNRGVVWLDQVSAMPLDTFKGHGYRKDLFQMVADLKPNFFRFPGGCYVEGNYLRNAFRWKDTVGPWEERPGHFNDVWNYWTDDGFGFFEGLQFAEDVGALPTWVFNNGLSLNDEVNTSAIAPFIQEALDGIEFARGSPKSQWGSLRASMGHPEPFDLRIVAIGNEECGMPKYQANYLKFHAAIKQAYPDIQIITNCDGSKKPLDHPADLYDFHIYTNATDMFSKSTKFDDAPRSGPKAFVSEYAVWKDDAGNGTLLAAVAEAAFLIGLERNSDVVHMVSYAPLFVNTNDRKWTPDAIVFDSHQHYGTPSYWVQHLFTTSSGATLLNTTLQTSTDSLVASAIEYTNPKDKKNYLRIKVVNFGSDQQNLRFSISGLTSNVQQSGAAKTVLTGPNVKEENSFSEPNKIAPQHSSLEDASGDMNVVLAPYSVTSFDLLK 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01173 773 SUPERFAMILY Glycosyl hydrolase domain 645 769 - -
Gma19g01173 773 Gene3D Glycosidases 97 179 - -
Gma19g01173 773 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 1 101 - -
Gma19g01173 773 SUPERFAMILY (Trans)glycosidases 333 665 IPR017853 -
Gma19g01173 773 Gene3D - 190 346 - -
Gma19g01173 773 Gene3D - 15 96 - -
Gma19g01173 773 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 1 101 - -
Gma19g01173 773 Gene3D - 655 771 IPR013780 -
Gma19g01173 773 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 116 153 - -
Gma19g01173 773 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 155 772 - -
Gma19g01173 773 MobiDBLite consensus disorder prediction 729 749 - -
Gma19g01173 773 Gene3D Glycosidases 347 654 - -
Gma19g01173 773 Pfam Alpha-L-arabinofuranosidase C-terminal domain 580 765 IPR010720 GO:0046373|GO:0046556
Gma19g01173 773 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 116 153 - -
Gma19g01173 773 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 155 772 - -
Gma19g01173 773 SMART alpha_l_af_c 579 765 IPR010720 GO:0046373|GO:0046556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01173 Gma-Chr19 40384685 40393739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01173 157 773 Glycoside Hydrolase AT3G10740 64.459 0.0 846
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01173 K01209 - gmx:100802745 1279.23