Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01161 ATGGAGGGGAATCTAGAGAAGAAGCTGTTGAGCAGAGAAAAAAAATCAGAAGAAGAAGAAGAAGAAGAGAAATTATCATTGGTGAAGAGGGTGTGGGAAGAGAGCAAGGTGATGTGGATAGTGGCAGCACCAGCCATATTCACAAGGTTCACCACCTTTGGCATCAGTGTTATAAGCCAAGCATTTATTGGTCATATTGGTTCAAGGGAACTCGCTGCTTATGCTCTTGTGTTCACTGTCATCATACGCTTTGCCAATGGTATTCTGTTAGGAATGGCAAGTGCGTTGTCAACACTTTGTGGACAAGCATACGGTGCAAAAGAATATGACATGATGGGAGTGTATCTTCAAAGATCATGGATAGTTTTATTCTTAACTGCAATCTGTCTTCTTCCCCTGTTGATCTTCACAAGCCCAATTTTGACTATCTTAGGCCAAGATGAGAGCATAGGACAAGTGGCAGGAACCATTTCTCTTTGGTCAATTCCTATCTTATTTGCTTATATTGTCTCAAACAACTGCCAGACATTCCTTCAATCTCAAAGCAAGAATGTCATTATTTCATTTTTGGCAGCTTTATCAATAATCATTCATGTGTCCCTCTCTTGGCTATTCACAATGCAATTCAAGTATGGGATTCCTGGGGCAATGATTTCAACAATTTTGGCATACTGGATTCCGAATATTGGTCAACTAATATTTATTACATGTGGTTGGTGCCCTGAAACATGGAAAGGTTTCTCTGTTTTAGCATTCAAAGATCTTTGGCCTGTTGCCAAGCTTTCCATTTCATCTGGTGCCATGTTATGTCTTGAGTTCTGGTACAGCACAATATTGATTCTTTTGACTGGTAACATGAAAAACGCCGAGGTTCAAATTGATGCTCTATCTATATGTATTAACATCAATGGATGGGAAATGATGATAGCATTTGGTTTCATGGCTGCAGCAAGTGTTAGAGTGGCAAATGAACTTGGAAGAGGAAGCTCCAAAGCTGCAAAGTTCTCTATAGTTGTGACAGTGCTTACATCCTTTGTAATTGGGTTTATCTTATTTCTTCTTTTTTTGTTTTTAAGAGAAAAAGTAGCTTATCTCTTTACTTCCAACGAAGACGTGGCTACTGCTGTGGGGGATTTGTCACCTCTGTTAGCTGTTTCTTTGTTACTAAATAGTATTCAACCTGTACTCTCAGGAGTGGCTGTTGGAGCAGGCTGGCAGAGCACTGTAGCATATGTGAACATAGGATGTTATTACCTCATAGGTATCCCGGTTGGAATAGTGCTTGGTAACATTATTCATTTGCAAGTCAAGGGTATTTGGATTGGAATGTTGTTTGGGACACTAATTCAAACTATAGTCCTAACTATAATCACCTACAAAACTAATTGGGATGAGCAGGTAATTATAGCCCGTAGTCGTATTAATAAGTGGTCTAAAGTGGAATCTGATCATGAAACAACTACATCAGATAATTAG 1476 0.3923 MEGNLEKKLLSREKKSEEEEEEEKLSLVKRVWEESKVMWIVAAPAIFTRFTTFGISVISQAFIGHIGSRELAAYALVFTVIIRFANGILLGMASALSTLCGQAYGAKEYDMMGVYLQRSWIVLFLTAICLLPLLIFTSPILTILGQDESIGQVAGTISLWSIPILFAYIVSNNCQTFLQSQSKNVIISFLAALSIIIHVSLSWLFTMQFKYGIPGAMISTILAYWIPNIGQLIFITCGWCPETWKGFSVLAFKDLWPVAKLSISSGAMLCLEFWYSTILILLTGNMKNAEVQIDALSICININGWEMMIAFGFMAAASVRVANELGRGSSKAAKFSIVVTVLTSFVIGFILFLLFLFLREKVAYLFTSNEDVATAVGDLSPLLAVSLLLNSIQPVLSGVAVGAGWQSTVAYVNIGCYYLIGIPVGIVLGNIIHLQVKGIWIGMLFGTLIQTIVLTIITYKTNWDEQVIIARSRINKWSKVESDHETTTSDN 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01161 491 PANTHER PROTEIN DETOXIFICATION 16 476 - -
Gma19g01161 491 CDD MATE_eukaryotic 34 467 IPR045069 GO:0042910|GO:1990961
Gma19g01161 491 Pfam MatE 44 204 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma19g01161 491 Pfam MatE 267 426 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma19g01161 491 TIGRFAM matE: MATE efflux family protein 44 440 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma19g01161 491 PANTHER MULTIDRUG RESISTANCE PROTEIN 16 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01161 Gma-Chr19 40240945 40245482 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01161 K03327 - gmx:100777237 896.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01161 19 40240945 40245482 Gma19g01161 19 40240945 40245482 ECH