Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01159 ATGGAGGGGCATCTAAAGCAGAAGCTGTTGAGAAACAAAGAGAGAAGAACATCATCAGAGCAAGAAGAAGAGGAGCTATCATTAGTGAAGAGGGTGTGGAATGAGAGCCAGGTGATGTGGATAGTGGCGGCACCAGCCATATTCACTAGGTTCTCCACCTTCGGAATCAGTGTCATAAGCCAAGCCTTTGTTGGCCATATTGGCTCTAAGGAATTGGCTGCATATGCTCTCGTTTTCACCGTTCTCGTTAGGTTCGCCAATGGTGTTCTCTTAGGAATGGCGAGTGCGTTGTCAACACTTTGTGGACAAGCATATGGTGCAAAAGAATATGGCATGATGGGAGTGTATCTTCAAAGATCATGGATAGTTTTGTTCCTAACTGCAGTCTGTCTTCTTCCGGTGTTCATCTTCACAAGCCCAATTTTGATGCTCTTGGGCCAAGATGAGAGCATAGCACAAGTGGCAGGAAACATTGCTCTTTGGTCAATTCCTGTCATGTTTGCCTCCATTGTCTCGTTCACTTGTCAGACATTCCTTCAATCTCAAAGCAAGAATGTCATCATTGCGTTCTTGGCAGCATTTTCGATAGTCATTCACGTGTTTCTATCGTGGCTTTTGACAATGAAGTTCCAGTTTGGGATTCCTGGTGCAATGATTTCAGCAGGCTTGGCATACTGGATTCCCAACATTGGTCAACTCATATTTGTCACCTGTGGTTGGTGTTCTGATACATGGGAAGGTTTCTCATTTTTGGCATTCAAAGACCTCTGGCCTGTTGTCAAGATGTCCCTTTCAGCTGGTGCTATGTTATGTCTTGAGCTCTGGTACAACACAATATTGGTTCTCTTAACGGGCAACATGGAAAATGCTGAGGTCCAAATTGATGCTCTATCTATATGCCTCAACATCAATGGATGGGAAATGATGATATCACTTGGTTTCATGGCTGCTGCAAGTGTTCGAGTGGCAAACGAGCTTGGAAAAGGAAGCTCCAAGGCTGCAAAGTTCTCTATAGTTGTGACAGTGCTTACATCCTTGGCCATTGGATTCGTTCTCTTCTTATTTTTCTTATTTTTAAGGGAAAAACTTGCTTACATATTTACCACAAATAAAGACGTGGCCCAGGCTGTTGGTGACTTGTCACCTTTGTTGGCAATCTCTATTCTACTAAACAGTGTCCAACCTGTACTCTCGGGAGTTGCTATTGGAGCAGGGTGGCAAAGCATTGTAGCATATGTGAATATTGGGTGTTATTACATCATAGGTGTTCCTGTAGGAGTTCTACTTGGTAATGTTCTGAATTTGCAAGTCAAGGGTATTTGGATTGGAATGTTGTTTGGAACATTTATTCTAACTGTAGTGCTAATTGTAATCACCTACAAAACTGATTGGGACAAGCAGGTTATTATAGCTCGTAATCGTATTAACAAGTGGTCTAAGGTAGAATCTGATCATGAAATAATTACATCAGATAATTAG 1479 0.4233 MEGHLKQKLLRNKERRTSSEQEEEELSLVKRVWNESQVMWIVAAPAIFTRFSTFGISVISQAFVGHIGSKELAAYALVFTVLVRFANGVLLGMASALSTLCGQAYGAKEYGMMGVYLQRSWIVLFLTAVCLLPVFIFTSPILMLLGQDESIAQVAGNIALWSIPVMFASIVSFTCQTFLQSQSKNVIIAFLAAFSIVIHVFLSWLLTMKFQFGIPGAMISAGLAYWIPNIGQLIFVTCGWCSDTWEGFSFLAFKDLWPVVKMSLSAGAMLCLELWYNTILVLLTGNMENAEVQIDALSICLNINGWEMMISLGFMAAASVRVANELGKGSSKAAKFSIVVTVLTSLAIGFVLFLFFLFLREKLAYIFTTNKDVAQAVGDLSPLLAISILLNSVQPVLSGVAIGAGWQSIVAYVNIGCYYIIGVPVGVLLGNVLNLQVKGIWIGMLFGTFILTVVLIVITYKTDWDKQVIIARNRINKWSKVESDHEIITSDN 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01159 492 Pfam MatE 45 205 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma19g01159 492 Pfam MatE 268 427 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma19g01159 492 PANTHER MULTIDRUG RESISTANCE PROTEIN 16 479 - -
Gma19g01159 492 CDD MATE_eukaryotic 35 468 IPR045069 GO:0042910|GO:1990961
Gma19g01159 492 PANTHER PROTEIN DETOXIFICATION 16 479 - -
Gma19g01159 492 TIGRFAM matE: MATE efflux family protein 45 441 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01159 Gma-Chr19 40143860 40223722 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01159 K03327 - gmx:100796360 857.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01159 19 40143860 40223722 Gma19g01159 19 40143860 40223722 ECH