Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01158 ATGGAAATGGAAGAGGAGCTAAAGGAGACGCTTATGCATCATCCAAACAACACTTCTTTGGAGAGTGTTGAAAAGGAAGAGTCATTGAGGAAAAGGGCATGGGAAGAAAGCAAGAAGATGTGGGTGGTAGCAGGCCCCGCCATATTCACAAGGTTTTCAACGTTTGGAATCATGGTGGTTAGTCAATCCTTCATTGGGCATATTGGCTCAACTGAACTAGCTGCCTATGCCATTGTTATGACTGTCCTAGTCAGGTTTGCAAATGGTGTATTGATTGGAATGGCAAGTGCATTGGATACTCTTTGTGGGCAAGCATATGGGGCCAAAAAATATGACATGCTAGGAGTGTATCTTCAAAGATCATGGATAGTGTTGTTCATGACCTCAATACTCCTTCTTCCTATTTACATCTTTACCACTCCTTTGTTAGAGGCTCTAGGCCAAGATAAAACCATTGCTCAAGTTGCTGGAAGCATTTCTCTGTGGTCAATAGGTATAATATTTGCTTTCTCTGTCTCATTCACCAGCCAAATGTTCCTACAATCACAGAGCAAGAACAAGATCATTGCCTACCTTGCAGCAGTTTCAATTTCAATTCATGTTTTGTTGTCATGGGTTTTAACTGTTCAGTTCAAGTTTGGGCTCAACGGTGCAATGACATCAACACTTTTAGCATATTGGATTCCTAACATTGGCCAGCTTGTGTTTATAATGACTAAGTGCCCTGACACATGGAAAGGTTTCTCATTCTTGGCCTTCAAAGATCTTTTGCCTGTTATCAAGCTTTCCCTCTCTTCTGGAGCTATGTTATGTCTTGAGATCTGGTACAACACTGTTTTGATTCTTCTTACAGGCAACATGAAAAATGCTGAAGTGTCTATTGATGCTCTGGCCATATGCCTCAACATTAGTGGGTGGGAAATGATGATAGCCCTTGGTTTCTTTGCTGCAGCAAGCGTCCGAGTGGCAAATGAGCTTGGAAGAGGGAATTCAAAGGCTACAAAATTTTCCATTCTGATAACAGTCCTCACATCATTTTCCATTGGATTCGTGTTATTCTTGGTGTTCCTATTTCTGAGGGGAAAACTTGCTTACATTTTCACTCCAGACCCTGAGGTTGCTAAAGCTGTTGGCGATTTATCACCATTGCTCTCATTTTCCTTCTTGTTGAACAGTGTCCAACCTGTGCTTTCTGGAGTTTCTGTGGGTGCTGGGTGGCAAAGCGTTGTAGCATATGTAAACATAGGCTGCTATTATCTTATTGGTATTCCTGTTGGAGTGCTGCTTGATAATCTTTTCCATTTGGAAGTTAAGGGTATTTGGATTGGAATGTTGTTTGGAACATTTGTTCAAACCGTAATGCTTATTACAATCACATTTAAAACTGATTGGGACAAGCAGGTAGAGATAGCTCGAAATCGTGTTAACAAATGGGCAGTGACGACGGAGAACGAAGAATCAAACAGTAGATCAAGCATATCTAGCTAG 1488 0.4133 MEMEEELKETLMHHPNNTSLESVEKEESLRKRAWEESKKMWVVAGPAIFTRFSTFGIMVVSQSFIGHIGSTELAAYAIVMTVLVRFANGVLIGMASALDTLCGQAYGAKKYDMLGVYLQRSWIVLFMTSILLLPIYIFTTPLLEALGQDKTIAQVAGSISLWSIGIIFAFSVSFTSQMFLQSQSKNKIIAYLAAVSISIHVLLSWVLTVQFKFGLNGAMTSTLLAYWIPNIGQLVFIMTKCPDTWKGFSFLAFKDLLPVIKLSLSSGAMLCLEIWYNTVLILLTGNMKNAEVSIDALAICLNISGWEMMIALGFFAAASVRVANELGRGNSKATKFSILITVLTSFSIGFVLFLVFLFLRGKLAYIFTPDPEVAKAVGDLSPLLSFSFLLNSVQPVLSGVSVGAGWQSVVAYVNIGCYYLIGIPVGVLLDNLFHLEVKGIWIGMLFGTFVQTVMLITITFKTDWDKQVEIARNRVNKWAVTTENEESNSRSSISS 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01158 495 PANTHER PROTEIN DETOXIFICATION 21 480 - -
Gma19g01158 495 MobiDBLite consensus disorder prediction 1 25 - -
Gma19g01158 495 CDD MATE_eukaryotic 36 469 IPR045069 GO:0042910|GO:1990961
Gma19g01158 495 Pfam MatE 268 427 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma19g01158 495 Pfam MatE 46 206 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma19g01158 495 PANTHER MULTIDRUG RESISTANCE PROTEIN 21 480 - -
Gma19g01158 495 TIGRFAM matE: MATE efflux family protein 46 441 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01158 Gma-Chr19 40135220 40139704 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01158 K03327 - gmx:100775619 916.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01158 19 40135220 40139704 Gma19g01158 19 40135220 40139704 ECH