Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01146 ATGGCCTCAAAGCTGCTTTTGAAGAGAAGGCTCTTTAGGTTTTTGCAACTGTCACAACCTTCTTTTTCTTCCATTCATGCAGCCCCAATCCTTTCTGTAAAAGCTTCAGAATTCATGTTCCCCTACAAGGAGAATGCCCTTCTTCCTCCTCTCTCTTCTTCTTCTAGAAACTTCTGCTCTCGCAGTTTTAATCTTGATGAATCTCAAGGCCCCCTGACTATTGATTACAGTTCTCTACTGCAGGAGGGTGAATTCCACAGACTGGCTGATTCCACAATACATAGCCTCCAAGAGAAATTAGAGGACTATGGAGACTCAGTTGAAGTTGATGGATTTGACATAGACTACGGCAATGATGTTTTGACTATAAAACTTGGCGATCTTGGCACCTATGTATTGAACAAACAAACACCAAATAGACAACTTTGGCTGTCTTCTCCAGTGAGTGGTCCTTCAAGGTTTGATTGGGATCGGGATACTAAAGCTTGGATTTATAGGCGGAACAAAGCAAACTTGTATAAAATTTTGGAAGGCGAGTTTGAGCAGTTATGTGGCAAACCTATTGATCTTTCCTAA 576 0.4149 MASKLLLKRRLFRFLQLSQPSFSSIHAAPILSVKASEFMFPYKENALLPPLSSSSRNFCSRSFNLDESQGPLTIDYSSLLQEGEFHRLADSTIHSLQEKLEDYGDSVEVDGFDIDYGNDVLTIKLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDRDTKAWIYRRNKANLYKILEGEFEQLCGKPIDLS 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01146 191 Gene3D Frataxin/CyaY 72 191 IPR036524 GO:0008199|GO:0016226
Gma19g01146 191 TIGRFAM FeS_CyaY: iron donor protein CyaY 82 189 IPR002908 GO:0008199|GO:0016226
Gma19g01146 191 SMART Frataxin_Cyay_2 80 191 IPR002908 GO:0008199|GO:0016226
Gma19g01146 191 ProSitePatterns Frataxin family signature. 132 146 IPR020895 -
Gma19g01146 191 SUPERFAMILY Frataxin/Nqo15-like 70 188 IPR036524 GO:0008199|GO:0016226
Gma19g01146 191 PRINTS Frataxin signature 80 98 IPR002908 GO:0008199|GO:0016226
Gma19g01146 191 PRINTS Frataxin signature 118 133 IPR002908 GO:0008199|GO:0016226
Gma19g01146 191 PRINTS Frataxin signature 133 148 IPR002908 GO:0008199|GO:0016226
Gma19g01146 191 PANTHER BNAA09G01420D PROTEIN 50 191 - -
Gma19g01146 191 CDD Frataxin 80 190 - -
Gma19g01146 191 PANTHER FRATAXIN 50 191 IPR002908 GO:0008199|GO:0016226
Gma19g01146 191 Pfam Frataxin-like domain 81 187 IPR002908 GO:0008199|GO:0016226
Gma19g01146 191 TIGRFAM mito_frataxin: frataxin 84 181 IPR017789 GO:0004322|GO:0005739
Gma19g01146 191 ProSiteProfiles Frataxin family profile. 80 188 IPR002908 GO:0008199|GO:0016226
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01146 Gma-Chr19 40002837 40007079 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01146 K19054 - gmx:100815916 372.089