Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01129 ATGCTAGCATGTCCTAGCAGCTCCCTCCATGGCCTCACGACGCTGCAACGCCATTCCCAACCATCTCACTTCCTCCTCTCCAAGCCTCTCTTTTTCCCTCGCTTAGCCGCTTCCCACAAATGCAACTTTCGTTCGCTCCTTTCCGGAAACAACCGTCGCCGTTCCGCCGTCAGAGCTTCCGCGGACTCGCCGGAGGTGCCGGAGTCTGTTGGTGTTGGCGACGGTGGTGGCCTGCAACCGTATTCCGTGAAGATTCCCGTCGGTGATAGACATATTTTGGTAGAGACTGCTCATATAGGAAGACAAGCAAGTGGCTCTGTTACAGTTACAGATGGAGAGACTATTGTGTACACAACTGTTTGCTTGGATGATGTTCCTTGTGAACCATCTGACTTTTTCCCTCTTTCTGTTATTTATCAAGAGCGTTTTTCAGCAGCTGGTCGCACTAGTGGAGGTTTTTTTAAGCGAGAAGGAAAGATAAAAGATCATGAGGTTCTTATTTGTAGATTGATTGATAGGCCTCTACGTCCTACAATGCCAAAGGGTTTCTATCATGAAACTCAAATATTATCTTGGGTTTTGAGCTATGATGGATTGCACTCCCCGGATTCTTTGGCTATCACTGCAGCTGGTATAGCAGTTGCACTTTCAGAAGTGCCAATGTCAAAAGCAGTTGCTGGAGTTCGTGTTGGTCTTGTTGGTGATAAGTATATAGTAAATCCTACAACTGAGGAGATGGAACACTCTGAGTTAGACCTCTTGCTGGCTGGCACAGATAATGCAATATTGATGATAGAGGGCTATAGCAATTTTCTTCCAGAAGAGAAATTACTTAAAGCTGTAGAAGTTGGTCAGAATGCAGTGCGAGCAATCTGTAATGAGGTAGAAGCTTTGGTTAAGAAATGTGGGAAGCCAAAGATGTTGGATGCCATCAAGTTGCCTCCTCCCGAACTTTATGAACATGTTGAAGCAATTGCCAGTGATGAGTTAGTAAAAGTTCTTCAAATTAGAAACAAAATTCCCAGAAGGAAAGCCCTTTCATCATTAGAAGAAAAGGTTCTGAAGATACTCACAGAAAACGGGTTTGTCTCAAATGATTCAACACTGAGGAGTAATTCTGAGACCATTGCGGAGATTCTTGAGGTTGAGGATGAAGATGAGGAAGTAATTGTTGATGGTGAAGTTGACGAAGGTGATGTTCATATAAAGCCAACTCCACGTAAACCAGCCCTTTTATTTTCTGAGGTGGATGTGAAGTTGGTATTTAAGGAAGTTACATCTAAATATTGGAGGAAGCGTATGGTAGAGGGGGGGAAAAGAAGCGATGGGCGTACACCTGACGGAATACGTCCAATCTACTCGAGATGTGGTCTATTACCTAGAGCACATGGAAGTACTCTTTTCACAAGAGGCGAGACACAGGCACTAGCAGTTGTTACACTTGGAGATAAACAAATGGCACAAAGAATTGACAGTCTTGATGGTGTTGATGAATTCAAGAGGTTCTATCTGCAGTATTCATTTCCTCCTTCATGTGTTGGGGAAGTTGGCCGGATTGGTGCCCCAAGTAGAAGAGAAATTGGTCATGGGATGCTTGCTGAGAGATCCCTTGAACCAATTTTGCCTTCTGAAGATGATTTCCCTTACACTATACGTGTTGAGAGTACTATCACAGAAAGCAATGGCTCTTCAAGCATGGCTTCTGTTTGTGGAGGTTGCTTAGCATTGCAAGATGCTGGGGTTCCTATTAAGGGTTCTATTGCTGGAATTGCAATGGGTATGGTACTGGACACCAAGGAATTTGGTGGAGATGGAACTCCGCTTATTCTGTCTGACATAACTGGATCTGAAGATGCATCTGGAGATATGGATTTCAAGGTTGCTGGAAATGAAGATGGCATAACTGCATTTCAAATGGACATTAAGGTGGGTGGAATTACTTTGCCCATCATGAGAAAGGCACTTCTACAAGCAAGAGATGGCAGGAAGCATATACTTG 1999 0.4407 MLACPSSSLHGLTTLQRHSQPSHFLLSKPLFFPRLAASHKCNFRSLLSGNNRRRSAVRASADSPEVPESVGVGDGGGLQPYSVKIPVGDRHILVETAHIGRQASGSVTVTDGETIVYTTVCLDDVPCEPSDFFPLSVIYQERFSAAGRTSGGFFKREGKIKDHEVLICRLIDRPLRPTMPKGFYHETQILSWVLSYDGLHSPDSLAITAAGIAVALSEVPMSKAVAGVRVGLVGDKYIVNPTTEEMEHSELDLLLAGTDNAILMIEGYSNFLPEEKLLKAVEVGQNAVRAICNEVEALVKKCGKPKMLDAIKLPPPELYEHVEAIASDELVKVLQIRNKIPRRKALSSLEEKVLKILTENGFVSNDSTLRSNSETIAEILEVEDEDEEVIVDGEVDEGDVHIKPTPRKPALLFSEVDVKLVFKEVTSKYWRKRMVEGGKRSDGRTPDGIRPIYSRCGLLPRAHGSTLFTRGETQALAVVTLGDKQMAQRIDSLDGVDEFKRFYLQYSFPPSCVGEVGRIGAPSRREIGHGMLAERSLEPILPSEDDFPYTIRVESTITESNGSSSMASVCGGCLALQDAGVPIKGSIAGIAMGMVLDTKEFGGDGTPLILSDITGSEDASGDMDFKVAGNEDGITAFQMDIKVGGITLPIMRKALLQARDGRKHIL 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01129 666 PANTHER POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE 59 666 IPR012162 GO:0003723|GO:0004654|GO:0006402
Gma19g01129 666 CDD RNase_PH_PNPase_2 449 666 - -
Gma19g01129 666 Gene3D - 74 305 IPR027408 -
Gma19g01129 666 Gene3D - 401 666 IPR027408 -
Gma19g01129 666 SUPERFAMILY Ribosomal protein S5 domain 2-like 422 594 IPR020568 -
Gma19g01129 666 Pfam 3' exoribonuclease family, domain 2 224 286 IPR015847 -
Gma19g01129 666 PIRSF PNPase 78 666 IPR012162 GO:0003723|GO:0004654|GO:0006402
Gma19g01129 666 SUPERFAMILY Ribosomal protein S5 domain 2-like 82 220 IPR020568 -
Gma19g01129 666 Pfam 3' exoribonuclease family, domain 1 90 220 IPR001247 -
Gma19g01129 666 Pfam 3' exoribonuclease family, domain 1 449 582 IPR001247 -
Gma19g01129 666 SUPERFAMILY Ribonuclease PH domain 2-like 222 307 IPR036345 -
Gma19g01129 666 SUPERFAMILY Ribonuclease PH domain 2-like 576 666 IPR036345 -
Gma19g01129 666 SUPERFAMILY Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 315 445 IPR036456 GO:0003723|GO:0006396
Gma19g01129 666 PANTHER POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE 1, CHLOROPLASTIC 59 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01129 Gma-Chr19 39601405 39660170 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01129 K00962 - gmx:100785430 1267.29