Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01103 ATGGATCTGGAGGGAATGGCTAAAATCTCCATCTTGTTGGTGGGGCTTTGGCTACTAGTTAACTGGTCAGGGTTGTTGGATGCAAAAAACATGAAGTACAAGAACCCTAAACACTCAACTGATACTCGGGTTGAGGATCTTGTTAGCAGGATGACTCTTGAGGAGAAAATTGGCCAAATGTTGCAGGTTGAGCGCAAGTATGTATCTGCTGATTTACTTAAGAAGTATTTTATTGTAGGGGCTGTATTGAGTGAGGGAGGGAGTATTCCAGCTCCACAGGCTTCTGCTGAAACCTGGATTGACATGGTGAATGAATTTCAGAAGGGTGCCTTATCAACCCGGCTCGGAATTCCAATGTTTTATGGGATTGATGCCGTTCATGGCCACAACACGGTTCACAACGCAACTATTTTTCCTCACAATATTGGCCTTGGAGCTACCAGGGACCCTGAACTAGTTAAGAGAATTGGAGCTGCAACTGCCCTTGAAGTTAGAGCAACAGGAATTCAATATGTTTATTCACCTTGTATAGCAGTCTGTAGAGATCCAAGATGGGGTCGGTGTTATGAAAGCTTCAGTGAAGATCCTGAACTAGTTCAAGCTATGACTGAAATTATACCAGGATTGCAAGGGGACATCCCTAATGATTCACCAAAGGGTGTCCCTTTTATCACTGGAAAAGAAAAAGTTATAGGTTGTGCTAAGCACTACGTGGGTGATGGTGGAACAATCAATGGGATTGATGAGCACAACACTGTTATAGATAGAGATGGATTGATGAAAATTCACATGCCAGGCTACTTCAGCTCAATCAGCAAGGGTGTGGCAACCATTATGGCCTCTTACTCCAGTTGGAATGGAGTAAAAATGCATGCTCACCATGATCTTATTACTGGCTTCCTCAAGAATACTCTCCATTTCAAGGGCTTTGTCATTTCAGATTTTGAGGGTCTTGATAGGATCACCTCTCCACCTCGTGCAAATATCACTTATTCAATTGAAGCAGGAGTTTCTGCTGGCATTGACATGTTCATGGTTCCAAAGCATTACACAGAATTCATAGATGTTCTAACCATGTTGGTGAAAAATAAGCACATTCCCATGAGTCGAATTGATGATGCAGTGGGAAGAATTTTGTGGGTTAAGTTGATGATGGGTATTTTTGAGAACCCTTTTGCTGACTACAGTTTGGTCAAATATTTAGGAATCCAGGAACACAGAAATTTGGCTAGGGAAGCAGTAAGGAAATCAATGGTCCTTCTGAAAAATGGTGAATCTGCTGACAAGCCTTTATTGCCTCTTCCTAAAAAGTCGCCAAAAATACTTGTTGCGGGAAGCCATGCTGATAATCTAGGATATCAGTGTGGTGGCTGGACCATAGAATGGCAAGGAGTTAGTGGAAACAATCTTCTCAAAGGGACTACAATTCTCACTGCTGTGAAAAACACTGTTGATCCTGAAACCACAGTGGTCTACAAGGAGAACCCTGATGTAGAGTTTGTCAAATCCAATGGATTTTCCTATGCCATAGTTATAGTAGGGGAGCACCCTTATGCTGAAATGTATGGTGACAGCATGAACTTGACAATCCCAGAACCTGGTCCTAAGATCATAACAAATGTCTGTGGAGCAATAAAATGCGTGGTTATCATTATTTCTGGTCGTCCTGTAGTTATTGAACCATATGTTGGTTTAATAGATGCACTTGTTGCTGCATGGCTCCCAGGTAGCGAAGGCCAAGGTGTGGCTGATGTTTTATATGGCGGCTATGGTTTCACTGGAAAGCTTCCAAGGACATGGTTCAAAACTGTTGATCAACTGCCAATGAATGTTGGAGATCCTCACTATGATCCCCTCTTCCCATTTGGGTTTGGCCTTTCTACCAAACCTTCTAAGGCCCTTTATTCCTCTTGA 1914 0.4258 MDLEGMAKISILLVGLWLLVNWSGLLDAKNMKYKNPKHSTDTRVEDLVSRMTLEEKIGQMLQVERKYVSADLLKKYFIVGAVLSEGGSIPAPQASAETWIDMVNEFQKGALSTRLGIPMFYGIDAVHGHNTVHNATIFPHNIGLGATRDPELVKRIGAATALEVRATGIQYVYSPCIAVCRDPRWGRCYESFSEDPELVQAMTEIIPGLQGDIPNDSPKGVPFITGKEKVIGCAKHYVGDGGTINGIDEHNTVIDRDGLMKIHMPGYFSSISKGVATIMASYSSWNGVKMHAHHDLITGFLKNTLHFKGFVISDFEGLDRITSPPRANITYSIEAGVSAGIDMFMVPKHYTEFIDVLTMLVKNKHIPMSRIDDAVGRILWVKLMMGIFENPFADYSLVKYLGIQEHRNLAREAVRKSMVLLKNGESADKPLLPLPKKSPKILVAGSHADNLGYQCGGWTIEWQGVSGNNLLKGTTILTAVKNTVDPETTVVYKENPDVEFVKSNGFSYAIVIVGEHPYAEMYGDSMNLTIPEPGPKIITNVCGAIKCVVIIISGRPVVIEPYVGLIDALVAAWLPGSEGQGVADVLYGGYGFTGKLPRTWFKTVDQLPMNVGDPHYDPLFPFGFGLSTKPSKALYSS 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01103 637 Gene3D - 26 402 IPR036962 GO:0004553|GO:0005975
Gma19g01103 637 Gene3D - 403 629 IPR036881 GO:0004553|GO:0005975
Gma19g01103 637 Pfam Glycosyl hydrolase family 3 C-terminal domain 418 627 IPR002772 GO:0004553|GO:0005975
Gma19g01103 637 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 418 627 IPR036881 GO:0004553|GO:0005975
Gma19g01103 637 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 10 637 - -
Gma19g01103 637 PANTHER BETA-D-GLUCOSIDE GLUCOHYDROLASE 10 637 - -
Gma19g01103 637 Pfam Glycosyl hydrolase family 3 N terminal domain 52 379 IPR001764 GO:0004553|GO:0005975
Gma19g01103 637 SUPERFAMILY (Trans)glycosidases 31 417 IPR017853 -
Gma19g01103 637 PRINTS Glycosyl hydrolase family 3 signature 114 130 IPR001764 GO:0004553|GO:0005975
Gma19g01103 637 PRINTS Glycosyl hydrolase family 3 signature 138 157 IPR001764 GO:0004553|GO:0005975
Gma19g01103 637 PRINTS Glycosyl hydrolase family 3 signature 230 246 IPR001764 GO:0004553|GO:0005975
Gma19g01103 637 PRINTS Glycosyl hydrolase family 3 signature 300 318 IPR001764 GO:0004553|GO:0005975
Gma19g01103 637 PRINTS Glycosyl hydrolase family 3 signature 184 200 IPR001764 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01103 Gma-Chr19 39166139 39169741 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01103 31 632 Glycoside Hydrolase AT5G20950 70.266 0.0 871
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01103 K05349 - gmx:100800077 1288.86