Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01098 ATGGCGAGCGATTCGATTCAGCAGAGCGAAGCCCAAGTGGCGCTAATCCTGGGCCCGGACTCGGCCCACCTGGAATCCCTAATCTCCCAATTGATGTCTTCCTCCAACGACCAGCGCTCCCAGGCGGAGTCCCTCTTCAACCTCTGCAAGCAGGCCCGCCCTGAGGCCCTCTTATTGGGCCTGGCCCACCTCCTCCACTCCTCCCCGAACCCGGAGACCCGCACCATGTCCGCCATCCTCCTCCGCCGCCACCTCACGCGCCACCACGACTCCTTCCTCTGGCCTCTCCTCTCCCCCCCGGCCCGCTCCTCCCTCCACTCCCTCCTCCTCTCCTCCCTCCACAACGAGCCCCTCAAATCCATCACCAAGAAGCTCTGCGACACCGTCTCCGAGCTCGCCGCCGCCACCCTCCCCGACGACTCTGCCGCCTGGcCCGACCTCCTCCCCCTCCTCTTCCAGTGGGTCACCTCCCCCGACCCCAGGCTCCAAGAAATCTCGCTCCTTATTTTCGCCCAATTGGCTCATTACATCGGCCAAACCCTACTCCCTCAAATCTCCACTCTCCACTCCGTCTTCCTCCGCTCCCTTCACTCCTCCACCCCCGCCGACGTCCGCATCGCCGCCCTCGCCGCCGCCATCAACTTCATCCAATGCCTCACGAATTCCTCCGACAGAGACCGCTTCCAAGACCTCCTCCCTCTCATGATGCAGACCCTCACCGAGGCGCTGAACTCCGGCCAGGAGGCCGTCGCTCAGGAGGCGCTTGAGCTTCTCATCGAGCTCGCTGGCACCGAGCCGCGCTTCCTCCGGCGACAAATTGTCGACGTCGTGGGGTCCATGTTACAGGTCGCAGAAGCTGAGACTTTGGAGGAAGGAACACGGCACTTGGCGATTGAGTTTGTGGTTACTCTCGCCGAGGCAAGGGAGCGTGCTCCCGGCATGATGAGGAAGTTTCCACAGTTTGTGAGGAAGCTTTTTGGTGTGTTGATGAATTTGGTGCTTGATATCGAGGATGATCCTGCGTGGCACGGTGCAGTGGATGAGGATGAGGACGCCGGCGAGACGAGTAACTATGGCTTTGGACAGGAGTGTCTGGATAGGCTTTCGATTTCGCTCGGTGGGAACACCATTGTGCCGGTTGCCTCTGAGTTGCTGCCCACCTACTTGGCTGCTCCTGAGTGGGAAAAGCACCATGCTGCGCTCATTGCTCTTGCGCAAATCGCCGAGGGTTGTTCCAAGGTTATGATAAAGAATCTGGAGCAGGTATTGTCAATGATTTTGAATTCATTTCGTGATCCTCACCCTCGAGTGCGATGGGCAGCTATAAATGCAATTGGGCAGTTGTCCACGGATTTGGGGCCAGACTTGCAGGTTAAATTTCACCACTTAGTGCTTCCGGCTTTGGCTGGAGCCATGGATGATTTTCAAAATCCAAGAGTACAGGCTCATGCTGCTTCTGCAGTGCTAAATTTCACTGAGAATTGTACCCCAGATATCCTAACACCTTACTTAGATGGGATTGTGAGCAAACTTTTGGTACTCCTGCAGAATGGGAAGCAAATGGTTCAAGAAGGGGCTTTGACAGCCTTAGCATCTGTTGCAGATTCTTCAGAGGTGCAATTTCAGAAGTATTATGATGCTGTGATGCCATACTTAAAAGCTATTTTGGTGAACGCAAATGATAAATCTAATCGTATGCTTCGAGCCAAAGCAATGGAGTGCATTAGTTTGGTAGGAATGGCTGTTGGAAAGGAGAAGTTCAGGGATGATGCCAAACAGGTCATGGATGTCTTGATGTCACTGCAACAATCTCAACTGGATGCTGATGATCCAACTGCAAGTTACATGTTACAAGCATGGGCACGGCTTTGCAAGTGCCTTGGGCAGGATTTTCTCCCATATATGGGTTTTGTGATGCCTCCTTTGCTCCAGTCTGCACAACTTAAGCCCGATGTGACCATTACATCAGCGGATTCTGATACTGAATTTGATGAAGATGATGACAGCATTGAAACAATTACACTTGGGGATAAAAGGATAGGCATTAAGACTAGTGTGTTGGAGGAGAAGGCCACTGCTTGTAACATGCTATGTTGCTATGCTGATGAGTTGAAGGAAGGATTTTTTCCTTGGATTGACCAGGTTGCTTTCACATTGGTTCCTCTTCTTAAATTTTACTTCCATGAAGAAGTTAGGAAGGCAGCAGTTTCAGCCATGCCGGAACTGTTGTCCTCGGCAAAATCAGCTGTAGTGAAGGGACAATCACAAGGTCGTGATGAGACTTATGTGAAACAGCTTTCTGATTATATAATACCAAATTTGGTGGAGGCTTTACACAAGGAGCCAGAAGTAGAAATTTGTGCAAGCATGTTGGATGCATTGAATGAATGCATACAGGTCTCTGGATCACATCTAGATGAAAAGCAAGTTCGGAGCATTGTTGATGAGATTAAACAAGTCCTTACGGCCAGTTCATCAAGAAAACATGAAAGAGCAGAGAGGGCCAAAGAAGAGGACTTTGATGCTGAAGAAAGAGAACTACTCAATGAAGAAAATGAGCAAGAAGAGGAGCTTTTTGATCAAGTTGGTGATTGCTTGGGAACTTTGATAAAAACATTCAGGACATCTTTCTTGCCTTTCTTTGATGAGCTGTCCTCATACCTAACACCTTTGTTTGGTAAAGACAAAACCTCAGAGGAAAGGAGAATTGCCATTTGTATATTTGATGATGTTGCTGAGCACGGTCGTGAAGCCGCTCTTAAATATTATGATTCTTTTCTTCCATTCTTACTCGAAGCTTGCAATGATGAATATCCCGATGTTCGACAGGCTGCTGTTTATGGTGTTGGTGTTTGTGCTGAGTTTGGTGGATCTGTTTTCAGCCCCCTTGTTGGAGAGGCACTTTCAAGGTTAGATGCTGTGATAAGGCATCCAAATGCACTACATGCTGATAACATAATGGCATATGACAATGCCGTCTCAGCTCTTGGAAAAATATGCCAATTCCATCGTGATAGCATAAATGCAGCACAGGTTGTTCCTGCCTGGCTAAGTTGCTTGCCTATAAAAGGTGATTTAATTGAAGCTAAGGTTGTGCATGACCAACTTTGTTCAATGGTTGAAAGATCTGATAGAGAACTTATAGGTCCCAACAATCAATATCTTTCCAAAATTGTTGCAGTTTTTGCCGAGATTTTATGTGCGGGAAATGATCTGGCTACCGAACAGACTTTTTGGTCAGAAGATGCGTGTCTATTGTCATGGGATGTCATAGTTACCTTTTCAGAAGCTGCTTTGTCAGGACTTGAGGTATGGCTTTGTCACAGAGGCAGAGCATTGTTGAGTTGGTTTGGATGGGAAACAGTTTTGGTGTGA 3375 0.4907 MASDSIQQSEAQVALILGPDSAHLESLISQLMSSSNDQRSQAESLFNLCKQARPEALLLGLAHLLHSSPNPETRTMSAILLRRHLTRHHDSFLWPLLSPPARSSLHSLLLSSLHNEPLKSITKKLCDTVSELAAATLPDDSAAWPDLLPLLFQWVTSPDPRLQEISLLIFAQLAHYIGQTLLPQISTLHSVFLRSLHSSTPADVRIAALAAAINFIQCLTNSSDRDRFQDLLPLMMQTLTEALNSGQEAVAQEALELLIELAGTEPRFLRRQIVDVVGSMLQVAEAETLEEGTRHLAIEFVVTLAEARERAPGMMRKFPQFVRKLFGVLMNLVLDIEDDPAWHGAVDEDEDAGETSNYGFGQECLDRLSISLGGNTIVPVASELLPTYLAAPEWEKHHAALIALAQIAEGCSKVMIKNLEQVLSMILNSFRDPHPRVRWAAINAIGQLSTDLGPDLQVKFHHLVLPALAGAMDDFQNPRVQAHAASAVLNFTENCTPDILTPYLDGIVSKLLVLLQNGKQMVQEGALTALASVADSSEVQFQKYYDAVMPYLKAILVNANDKSNRMLRAKAMECISLVGMAVGKEKFRDDAKQVMDVLMSLQQSQLDADDPTASYMLQAWARLCKCLGQDFLPYMGFVMPPLLQSAQLKPDVTITSADSDTEFDEDDDSIETITLGDKRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIDQVAFTLVPLLKFYFHEEVRKAAVSAMPELLSSAKSAVVKGQSQGRDETYVKQLSDYIIPNLVEALHKEPEVEICASMLDALNECIQVSGSHLDEKQVRSIVDEIKQVLTASSSRKHERAERAKEEDFDAEERELLNEENEQEEELFDQVGDCLGTLIKTFRTSFLPFFDELSSYLTPLFGKDKTSEERRIAICIFDDVAEHGREAALKYYDSFLPFLLEACNDEYPDVRQAAVYGVGVCAEFGGSVFSPLVGEALSRLDAVIRHPNALHADNIMAYDNAVSALGKICQFHRDSINAAQVVPAWLSCLPIKGDLIEAKVVHDQLCSMVERSDRELIGPNNQYLSKIVAVFAEILCAGNDLATEQTFWSEDACLLSWDVIVTFSEAALSGLEVWLCHRGRALLSWFGWETVLV 1124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01098 1124 Gene3D - 20 1083 IPR011989 -
Gma19g01098 1124 SUPERFAMILY ARM repeat 23 957 IPR016024 -
Gma19g01098 1124 Pfam Importin repeat 288 379 IPR041653 -
Gma19g01098 1124 Pfam HEAT repeats 388 487 - -
Gma19g01098 1124 PANTHER BNAC09G37860D PROTEIN 14 1077 - -
Gma19g01098 1124 Pfam HEAT repeat 926 954 IPR000357 GO:0005515
Gma19g01098 1124 Coils Coil 833 857 - -
Gma19g01098 1124 PANTHER IMPORTIN BETA 14 1077 IPR040122 GO:0006606
Gma19g01098 1124 SMART TOG_3 371 612 IPR034085 -
Gma19g01098 1124 Pfam Importin repeat 6 787 889 IPR041389 -
Gma19g01098 1124 ProSiteProfiles HEAT repeat profile. 422 460 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01098 Gma-Chr19 39129137 39139144 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01098 K20222 - gmx:100797431 1998.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01098 19 39129137 39139144 Gma19g01098 19 39129137 39139144 ECH
Gma19g01098 19 39129137 39139144 Gma16g00363 16 3776907 3786490 GST