Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01096 ATGAGAGAGATAATTAGTATTCATATTGGACAAGCTGGAATTCAGGTGGGGAATTCATGCTGGGAGTTGTATTGCCTTGAGCATGGAATTAACCCTGATGGCACCATGCCTAGTGATACCTCAGTTGGTGTAGCACATGATGCTTTCAACACCTTCTTCAGCGAGACGGGATCCGGCAAGCATGTGCCAAGGGCTTTATTTGTTGATCTGGAACCTAGTGTTATTGATGAAGTAAGAACTGGTCCTTACAGACAACTCTTTCACCCTGAGCAATTAATTTCTGGCAAGGAAGATGCTGCTAATAACTTCGCAAGGGGACACTACACTGTTGGAAGAGAAATTGTTGAACTATGCCTTGATCGTATCAGAAAATTAGCAGACAATTGCACTGGTTTGCAAGGATTCTTGGTTTTCAATGCTGTTGGTGGTGGTACTGGTTCTGGTTTGGGATCATTACTGTTGGAGCGGTTATCTGTCGATTATGGGAAGAAGTCTAAACTTGGCTTTACCATCTATCCTTCTCCACAGGTATCTACTGCAGTTGTTGAACCTTACAACAGTGTCCTTTCCACTCATTCTCTTCTTGAGCACACTGATGTGGTTGTGCTTTTGGACAACGAAGCTATATATGATATCTGCAGAAGATCATTAGATATAGAAAGGCCAACTTACACTAACTTGAACCGTCTGATATCTCAAATTATCTCTTCCTTGACCACTTCCCTGAGATTTGATGGCGCGATTAATGTGGACATTACCGAGTTCCAGACTAATCTCGTGCCATATCCTCGTATTCACTTCATGCTTTCATCTTATGCCCCTGTAATATCTGCTGCAAAGGCCTACCATGAGCAGCTATCAGTTCCCGAGATCACCAGCGCTGTTTTTGAGCCATCAAGTATGATGGCTAAGTGTGATCCAAGACATGGCAAGTACATGGCATGCTGCCTGATGTATCGCGGAGACGTTGTTCCCAAAGATGTAAATGCAGCTGTTTCAAATATCAAGGCAAAGAGAACAGTTCAGTTTGTTGACTGGTGCCCTACTGGTTTCAAGTGTGGTATCAACTACCAGCCTCCAACAGTGGTACCAGCAGGTGATCTGGCCAAGGTGCAGCGAGCGGTTTGTATGATAAGCAACAACACAGCTGTTGCTGAGGTTTTCTCACGCATTGATTACAAGTTTGACCTCATGTATGCTAAGAGGGCATTTGTCCACTGGTATGTGGGTGAAGGAATGGAAGAAGGTGAATTCTCTGAAGCCCGGGAGGATCTTGCTGCCCTTGAAAAGGACTACGAAGAGGTTGGAGCAGAAGGCGAAGAAGAAGAAGAAGAACCCGATGATTACTCAAAGTAG 1356 0.444 MREIISIHIGQAGIQVGNSCWELYCLEHGINPDGTMPSDTSVGVAHDAFNTFFSETGSGKHVPRALFVDLEPSVIDEVRTGPYRQLFHPEQLISGKEDAANNFARGHYTVGREIVELCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITSAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVSNIKAKRTVQFVDWCPTGFKCGINYQPPTVVPAGDLAKVQRAVCMISNNTAVAEVFSRIDYKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEGEEEEEEPDDYSK 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01096 451 MobiDBLite consensus disorder prediction 430 451 - -
Gma19g01096 451 ProSitePatterns Tubulin-beta mRNA autoregulation signal. 1 4 IPR013838 -
Gma19g01096 451 CDD alpha_tubulin 2 432 - -
Gma19g01096 451 SMART Tubulin_C_4 248 393 IPR018316 -
Gma19g01096 451 Coils Coil 418 445 - -
Gma19g01096 451 Gene3D Tubulin/FtsZ, GTPase domain 1 268 IPR036525 -
Gma19g01096 451 SUPERFAMILY Tubulin C-terminal domain-like 246 435 IPR008280 -
Gma19g01096 451 PANTHER TUBULIN ALPHA CHAIN 1 447 - -
Gma19g01096 451 PRINTS Alpha-tubulin signature 18 33 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Gma19g01096 451 PRINTS Alpha-tubulin signature 45 58 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Gma19g01096 451 PRINTS Alpha-tubulin signature 88 101 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Gma19g01096 451 PRINTS Alpha-tubulin signature 120 128 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Gma19g01096 451 PRINTS Alpha-tubulin signature 148 160 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Gma19g01096 451 PRINTS Alpha-tubulin signature 161 172 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Gma19g01096 451 PRINTS Alpha-tubulin signature 214 226 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Gma19g01096 451 PRINTS Alpha-tubulin signature 274 289 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Gma19g01096 451 PRINTS Alpha-tubulin signature 321 342 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Gma19g01096 451 PRINTS Alpha-tubulin signature 347 360 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Gma19g01096 451 PRINTS Alpha-tubulin signature 360 379 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Gma19g01096 451 PRINTS Alpha-tubulin signature 385 401 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Gma19g01096 451 PRINTS Alpha-tubulin signature 422 438 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Gma19g01096 451 Pfam Tubulin C-terminal domain 263 392 IPR018316 -
Gma19g01096 451 MobiDBLite consensus disorder prediction 434 451 - -
Gma19g01096 451 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 142 148 IPR017975 GO:0005525|GO:0005874|GO:0007017
Gma19g01096 451 SMART Tubulin_4 49 246 IPR003008 GO:0005525
Gma19g01096 451 PRINTS Tubulin signature 10 30 IPR000217 GO:0005874|GO:0007017
Gma19g01096 451 PRINTS Tubulin signature 53 72 IPR000217 GO:0005874|GO:0007017
Gma19g01096 451 PRINTS Tubulin signature 95 106 IPR000217 GO:0005874|GO:0007017
Gma19g01096 451 PRINTS Tubulin signature 108 132 IPR000217 GO:0005874|GO:0007017
Gma19g01096 451 PRINTS Tubulin signature 134 152 IPR000217 GO:0005874|GO:0007017
Gma19g01096 451 PRINTS Tubulin signature 153 174 IPR000217 GO:0005874|GO:0007017
Gma19g01096 451 PRINTS Tubulin signature 178 191 IPR000217 GO:0005874|GO:0007017
Gma19g01096 451 PRINTS Tubulin signature 192 212 IPR000217 GO:0005874|GO:0007017
Gma19g01096 451 PRINTS Tubulin signature 380 408 IPR000217 GO:0005874|GO:0007017
Gma19g01096 451 Gene3D Helix hairpin bin 384 436 IPR023123 -
Gma19g01096 451 SUPERFAMILY Tubulin nucleotide-binding domain-like 1 244 IPR036525 -
Gma19g01096 451 PANTHER TUBULIN 1 447 IPR000217 GO:0005874|GO:0007017
Gma19g01096 451 Pfam Tubulin/FtsZ family, GTPase domain 3 213 IPR003008 GO:0005525
Gma19g01096 451 Gene3D - 269 383 IPR037103 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01096 Gma-Chr19 39112469 39115654 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01096 K07374 - gmx:100796371 852.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01096 19 39112469 39115654 Gma19g01096 19 39112469 39115654 ECH
Gma19g01096 19 39112469 39115654 Gma16g00365 16 3795725 3798863 GST
Gma19g01096 19 39112469 39115654 Gma16g01405 16 33069785 33074720 PCT
Gma16g01405 16 33069785 33074720 Gma19g01096 19 39112469 39115654 PCT