LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma19g01079	ATGAATGCACTAGCAGCCACCAACAGGAACTTTAAGTTGGCCTCTAGGCTTCTGGGATTGGATTCAAAGCTTGAGAAAAGTTTGCTGATTCCATTCAGGGAAATCAAGGCAAGTAAAATTACTTCTTGTGTTGAATGTACCATACCTAAAGATGATGGCACGTTGCAATCTTATGTTGGGTTCAGGGTTCAACATGATAATGCCAGAGGCCCCATGAAAGGAGGAATCAGATACCATCCTGAGGTTGACCCTGATGAAGTGAATGCTTTAGCACAACTAATGACATGGAAAACAGCTGTAGCAAATATACCATATGGTGGTGCCAAAGGAGGGATAGGGTGTGACCCAGCAGAATTAAGTATATCTGAGTTAGAAAGACTTACTAGAGTTTTTACACAAAAAATTCATGATTTGATTGGAACTCACACAGATGTGCCAGCACCTGATATGGGAACAGGGCCACAGACCATGGCATGGATACTAGATGAGTATTCCAAATTCCACGGTTACTCTCCTGCAGTAGTGACTGGAAAACCTATAGATCTTGGTGGATCTCTAGGTAGAGACGCGGCTACAGGACGGGGAGTCCTCTTTGCAACAGAGGCTTTGCTTAATGAGTATGGGAAGAGTGTATCTGGACAACGGTTTGTCATACAGGGTTTTGGAAATGTAGGGTCATGGGCTGCCCAATTAATTAGTGAGAAAGGTGGAAAAGTTGTAGCTGTGAGTGACATAACTGGAGCCATAAAGAACAGCAATGGTCTTGACATCCCAAACCTTCTTGAGCATTCCAAAGTGCACAGGGGAGTAAAAGGATTCCATGGTGGTGATCCAATTGACCCTAACTCAATATTGGTTGAAGATTGTGATGTTCTAGTCCCAGCGGCTCTTGGGGGTGTCATCAATAGGGAAAATGCAAATGAAATCAAGGCCAAATTTATTGTGGAAGCAGCTAATCACCCAACTGACCCAGAGGCTGATGAGATTCTGAAGAAGAAAGGGGTTGTTATCCTCCCAGACATATTTGCAAACTCAGGAGGCGTTACAGTTAGCTACTTTGAGTGGGTCCAGCAAATTGCTCATTTTAGAGGAATTGCACCCCTGCTGTACAGGTTAATTAATTAA	1125	0.4347	MNALAATNRNFKLASRLLGLDSKLEKSLLIPFREIKASKITSCVECTIPKDDGTLQSYVGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCDPAELSISELERLTRVFTQKIHDLIGTHTDVPAPDMGTGPQTMAWILDEYSKFHGYSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEYGKSVSGQRFVIQGFGNVGSWAAQLISEKGGKVVAVSDITGAIKNSNGLDIPNLLEHSKVHRGVKGFHGGDPIDPNSILVEDCDVLVPAALGGVINRENANEIKAKFIVEAANHPTDPEADEILKKKGVVILPDIFANSGGVTVSYFEWVQQIAHFRGIAPLLYRLIN	374

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma19g01079	374	ProSitePatterns	Glu / Leu / Phe / Val dehydrogenases active site.	103	116	IPR033524	-
	Gma19g01079	374	Gene3D	Leucine Dehydrogenase, chain A, domain 1	42	182	-	-
	Gma19g01079	374	PANTHER	GLUTAMATE DEHYDROGENASE	1	362	-	-
	Gma19g01079	374	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	183	362	IPR036291	-
	Gma19g01079	374	SMART	ELFV_dehydrog_3	185	364	IPR006096	GO:0006520\|GO:0016491
	Gma19g01079	374	CDD	NAD_bind_1_Glu_DH	183	363	IPR033922	GO:0016639
	Gma19g01079	374	PANTHER	BNAA05G37230D PROTEIN	1	362	-	-
	Gma19g01079	374	PIRSF	Glu_DH	1	365	IPR014362	GO:0016639
	Gma19g01079	374	Pfam	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase	183	361	IPR006096	GO:0006520\|GO:0016491
	Gma19g01079	374	PRINTS	Glutamate/leucine/phenylalanine/valine dehydrogenase signature	95	109	IPR006095	GO:0006520\|GO:0016491
	Gma19g01079	374	PRINTS	Glutamate/leucine/phenylalanine/valine dehydrogenase signature	216	236	IPR006095	GO:0006520\|GO:0016491
	Gma19g01079	374	PRINTS	Glutamate/leucine/phenylalanine/valine dehydrogenase signature	343	354	IPR006095	GO:0006520\|GO:0016491
	Gma19g01079	374	PRINTS	Glutamate/leucine/phenylalanine/valine dehydrogenase signature	174	196	IPR006095	GO:0006520\|GO:0016491
	Gma19g01079	374	Pfam	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain	43	166	IPR006097	GO:0006520\|GO:0016491
	Gma19g01079	374	SUPERFAMILY	Aminoacid dehydrogenase-like, N-terminal domain	11	185	IPR046346	-
	Gma19g01079	374	Gene3D	-	183	365	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma19g01079	Gma-Chr19	38919797	38923775	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma19g01079	1	303	EF-hand Containing Proteins	AT5G07440	78.218	4.94e-178	495

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma19g01079	K00261		-	gmx:100789509	699.893

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma19g01079	19	38919797	38923775	Gma19g01079	19	38919797	38923775	ECH
	Gma19g01079	19	38919797	38923775	Gma16g00373	16	3895756	3903573	GST
	Gma19g01079	19	38919797	38923775	Gma16g01400	16	33011190	33016069	PCT
	Gma16g01400	16	33011190	33016069	Gma19g01079	19	38919797	38923775	PCT