Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00180 ATGGGGATTGAGAGGACCTTGGCTGATAGAAAAGGAAGAGACTTTTGTGAATTGCCGAGAGAAACCATTGCCAGCAGCAACTCAAGGAGGAACCGGCGGCGACAGAGGAAGAAGCCGCCGGTTCAGAAGCTCTTCGAGACTTGCAAGGTTGTGTTTGCCTCTGCGGGGACAGGCTTTGTCCCTCCCCATGAGGACATTGACGAGTTGCAATCTGTTCTAGATGGAATAAAGCCAGAAGATGTTGGTTTGAGACCAGATATGCCGTATTTCAGGACAAGTGCCACACAGAGAGTGCCAAGAATCACGTACCTGCACATTTATGAGTGTGAAAAGTTCTCGATGGGGATATTTTGTTTGCCACCTTCTGGGGTCATCCCTCTTCACAATCACCCTGGAATGACGGTTTTCAGTAAGCTACTTTTTGGCACTATGCACATCAAGTCATATGATTGGGTCGTTGACTCGCCTCCTGAATCTCCTACAACTCTCAAACCATCAGAAAACCAAGGTCCTGAGATGAGGTTAGCCAAAGTTAAGGTTGATGCTGATTTCACTGCTCCTTGCAACCCTTCCATCCTTTATCCAGAAGATGGGGGCAACTTGCACTGTTTCACAGCAGTGACAGCATGCGCAGTTCTAGATGTGCTTGGTCCTCCATATTCTGATGCTGAAGGCAGACACTGCACATACTACCACGATTTCCCCTTTTCCAACTTTTCAGTGGATGGATTATCCATACCAGAAGAGGAAAAGAATGCTTATGAATGGCTACAAGAGAGGGATGAACTTGAAGACCTAGAAGTAAATGGAAAAATGTACAACGGTCCAAAGATTGTTGAGAGCTAA 846 0.4645 MGIERTLADRKGRDFCELPRETIASSNSRRNRRRQRKKPPVQKLFETCKVVFASAGTGFVPPHEDIDELQSVLDGIKPEDVGLRPDMPYFRTSATQRVPRITYLHIYECEKFSMGIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKSYDWVVDSPPESPTTLKPSENQGPEMRLAKVKVDADFTAPCNPSILYPEDGGNLHCFTAVTACAVLDVLGPPYSDAEGRHCTYYHDFPFSNFSVDGLSIPEEEKNAYEWLQERDELEDLEVNGKMYNGPKIVES 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00180 281 Pfam PCO_ADO 72 278 IPR012864 GO:0016702
Gma19g00180 281 PANTHER UNCHARACTERIZED 24 280 IPR012864 GO:0016702
Gma19g00180 281 CDD cupin_ADO 110 221 - -
Gma19g00180 281 PANTHER PLANT CYSTEINE OXIDASE 2 24 280 - -
Gma19g00180 281 SUPERFAMILY RmlC-like cupins 39 234 IPR011051 -
Gma19g00180 281 Gene3D Jelly Rolls 35 254 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00180 Gma-Chr19 2200471 2204903 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00180 K23953 - gmx:100797790 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g00180 19 2200471 2204903 Gma19g00180 19 2200471 2204903 ECH
Gma13g00476 13 17135697 17139487 Gma19g00180 19 2200471 2204903 GST
Gma19g00180 19 2200471 2204903 Gma18g02343 18 57535344 57543304 PCT
Gma19g00180 19 2200471 2204903 Gma09g02201 09 47519786 47524669 PCT
Gma18g02343 18 57535344 57543304 Gma19g00180 19 2200471 2204903 PCT
Gma09g02201 09 47519786 47524669 Gma19g00180 19 2200471 2204903 PCT