Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02168 ATGGAGACCACAGAGCTCCACCATGCTCCTGAGGGTCTTGTTGACACAAATGGAGGAGACTACACTGAAATGAGTGGCTTTGCAGATTTCAAAAACGTGTTCTCTGTGGAATCTATAAAGCTTTGGACAATTGCTGCTCCCATTGCCTTCAGCATACTATGCAATTATGCTGTCAATTCCTTCACGACTATCTTTGTTGGTCATCTTGGAGATTTAGAACTCTCTTCAGTTTCACTCTCTCTCTCTGTCGTTTCAAATTTCTCTTTTGGCTTCTTGCTTGGTATGGCAAGTGCACTAGAGACTTTATGTGGGCAAGCATTTGGTGCTGGACAAGTAGAAATGATAGGGGTCTACATGCAACGTTCTTGGTTAATCTTATTGGGTGCATGCATCTGCCTCACACCAATTTACATTTATGCTGAGCCAATCTTGCTACTCCTAGGACAAGAACCCGAAATTGCAGAATTAGCTGGGGCATTTACCATTCAATCCATCCCTCAGATGTTTTCTCTAGCCATCAATTTCCCCACTCAAAAGTTCTTGCAGGCACAAACCAAAGTGGGGTTTCTGGCATGGCTTGGTTTTGGAGCATTTATTTTTCATGTTATACTTCTATGGATTTTACTTAAAGTGTTTTCATTGGGTACAACTGGTGCTGCTGTAGCCTATTGCACAACAGCTTGGATTATTGCTTTGGCTCAAACGGCTTATGTGATTGGTTGGTGCAAGGATGGGTGGAGAGGCTTCTCATGGTTAGCATTCAAAGATCTTTGGGCCTTTGTGAAATTGTCTGTTGCTTCAGCAGTCATGCTTTGCCTAGAGATTTGGTATTTCATGATCTTGATTGTGCTCACTGGACACCTTGACAATGCAGTTATTGCTGTTGGTTCTCTTTCAATATGCATGACTATCAATGGATTTGAAGGCATGTTATTTATAGGGATCAATGCAGCAATTAGTGTGAGGGTTTCAAATGAGCTTGGATCAGGACGCCCAAGAGCAGCAAAATATTCAGTCATTGTCACAATTATTGAGTCCCTCATCATTGGGTTAATTAGTGCAGCCATTATTTTAGCTACAAAAGATCATTTTGCCATCATTTTCACTGAGAGTAAAGAGATGATAAAAGCAGTTTCTAAATTAGCAGGTCTTCTTGGCATAACCATGATTCTGAATAGTGTTCAGCCAGTTATATCAGGTGTTGCTGTAGGAGGAGGGTGGCAAGCTTTGGTAGCTTACATCAATCTATTTTGCTATTACATCATGGGGCTCCCTCTTGGCTTCCTTTTAGGTTACAAGTTGGGTTACAGAGTGGAGGGTATTTGGGTTGGAATGATCTGTGGGACAATGTTGCAAACGCTCATCTTGTTGTACATTGTCTATAAAACAAACTGGAACAAGGAGGTTGAGCAAGCATCAGAACGAATGCGGAAATGGACCGGACAAGAAATTGAAATTAATTTGGCAAATTCTCAGCAAACATTCACTCGGTGA 1494 0.415 METTELHHAPEGLVDTNGGDYTEMSGFADFKNVFSVESIKLWTIAAPIAFSILCNYAVNSFTTIFVGHLGDLELSSVSLSLSVVSNFSFGFLLGMASALETLCGQAFGAGQVEMIGVYMQRSWLILLGACICLTPIYIYAEPILLLLGQEPEIAELAGAFTIQSIPQMFSLAINFPTQKFLQAQTKVGFLAWLGFGAFIFHVILLWILLKVFSLGTTGAAVAYCTTAWIIALAQTAYVIGWCKDGWRGFSWLAFKDLWAFVKLSVASAVMLCLEIWYFMILIVLTGHLDNAVIAVGSLSICMTINGFEGMLFIGINAAISVRVSNELGSGRPRAAKYSVIVTIIESLIIGLISAAIILATKDHFAIIFTESKEMIKAVSKLAGLLGITMILNSVQPVISGVAVGGGWQALVAYINLFCYYIMGLPLGFLLGYKLGYRVEGIWVGMICGTMLQTLILLYIVYKTNWNKEVEQASERMRKWTGQEIEINLANSQQTFTR 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02168 497 Pfam MatE 267 429 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma18g02168 497 Pfam MatE 47 207 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma18g02168 497 PANTHER PROTEIN DETOXIFICATION 11 478 - -
Gma18g02168 497 Coils Coil 462 482 - -
Gma18g02168 497 CDD MATE_eukaryotic 37 471 IPR045069 GO:0042910|GO:1990961
Gma18g02168 497 PANTHER MULTIDRUG RESISTANCE PROTEIN 11 478 - -
Gma18g02168 497 TIGRFAM matE: MATE efflux family protein 47 442 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02168 Gma-Chr18 55398866 55402489 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02168 K03327 - gmx:100786991 936.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02168 18 55398866 55402489 Gma09g02355 09 48936745 48940567 GST