Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01901 ATGATAATGACTCGTTTGAGTTGCACGACTCAGTGGCTCACTCGGGAGAGGGATAATAGTGAGGTACAGAGCTCTACGAGCTTGATGCAGAGAGGAACATGCGACAGAGGAACTCCAGCAGCACTCACAGCGCTAACCCCTTCTCTCTCTCACTGTCCGGTTCTCCGATCGCCGTCTTTGCCCTGCCCATTCCTGATCAATATGTCTCGAAGATATGATAGCCGTACTACAATCTTCTCCCCTGAAGGACGTCTTTACCAAGTGGAATATGCTATGGAGGCCATTGGGAATGCTGGTACTGCAATAGGGATCTTGTCAAAAGATGGGGTAGTTCTGGTTGGTGAGAAGAAAGTCACATCCAAGCTGCTGCAAACCTCAACTTCCACCGAGAAAATGTACAAGATTGATGATCATGTTGCATGTGCCGTGGCTGGAATTATGTCTGATGCTAACATCCTAATCAATACTGCTAGAGTTCAGGCACAGCGCTACACGTATGCTTACCAAGAGCCAATGCCGGTTGAGCAGTTGGTTCAATCTCTTTGTGACACTAAGCAAGGTTACACACAATTTGGTGGTCTTCGTCCATTTGGAGTCTCGTTCCTCTTTGCTGGCTGGGACAAGAATTTTGGCTTTCAACTTTACACTAGTGACCCCAGTGGAAATTATGGTGGTTGGAAAGCTGCAGCTATTGGTGCCAACAACCAGGCAGCACAGTCAATTCTGAAACAGGACTACAAGGATGATATCACAAGGgaagaagcagttcaacttgcactgaaggtgctaagtaaaactatggacagcacaagtcttacctctgaAAAGCTTGAGCTTGCAGAGGTATTTCTCTCACCCTCTGGAAAAGTCAAGTATCAAGTTTGCTCCCCAGAAAACCTGACTAAGCTGTTGGTGAAGTTTGGGGTGACTCAACCGGCAGCAGACACTGCTTAG 954 0.4403 MIMTRLSCTTQWLTRERDNSEVQSSTSLMQRGTCDRGTPAALTALTPSLSHCPVLRSPSLPCPFLINMSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNFGFQLYTSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDITREEAVQLALKVLSKTMDSTSLTSEKLELAEVFLSPSGKVKYQVCSPENLTKLLVKFGVTQPAADTA 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01901 317 Pfam Proteasome subunit 97 281 IPR001353 GO:0005839|GO:0051603
Gma18g01901 317 ProSitePatterns Proteasome alpha-type subunits signature. 72 94 IPR000426 GO:0006511|GO:0019773
Gma18g01901 317 ProSiteProfiles Proteasome alpha-type subunit profile. 87 304 IPR023332 -
Gma18g01901 317 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 68 316 - -
Gma18g01901 317 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 68 316 IPR029055 -
Gma18g01901 317 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 71 303 IPR029055 -
Gma18g01901 317 PANTHER PROTEASOME SUBUNIT ALPHA TYPE-4-A 68 316 IPR034647 GO:0019773
Gma18g01901 317 SMART Proteasome_A_N_2 72 94 IPR000426 GO:0006511|GO:0019773
Gma18g01901 317 CDD proteasome_alpha_type_4 70 282 - -
Gma18g01901 317 Pfam Proteasome subunit A N-terminal signature 72 94 IPR000426 GO:0006511|GO:0019773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01901 Gma-Chr18 52000377 52004852 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01901 K02728 - gmx:100786457 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01901 18 52000377 52004852 Gma07g01446 07 19524285 19524965 GST
Gma18g01901 18 52000377 52004852 Gma01g01276 01 45205244 45205924 PCT
Gma01g01276 01 45205244 45205924 Gma18g01901 18 52000377 52004852 PCT