Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01796 ATGGTGGCGGGTGGCAATTCCAAATCCGACATCTCCTTTGCTGGCACTTACGCTAGCAGTGCTTTCGCTGCATGTTTCGCCGAGGTGTGTACTCTTCCTTTGGACACCGCCAAAGTTAGGCTTCAGCTTCAAAAACAAGCTGTAGTTGGTGATGTGGTGACCTTACCTAAATATAGGGGTTTGCTGGGAACGATTGGAACCATTGCCAGGGAAGAAGGTCTTTCAGCACTCTGGAAGGGGATTGTGCCAGGGCTACATCGTCAATGTTTGAATGGTGGTTTAAGAATTGCGTTATATGAGCCTGTTAAGAATTTCTATGTTGGGCCTGACCATGTTGGAGATGTTCCATTGTTTAAGAAAATTCTCGCTGGATTTACAACTGGTGCTATGGCAATTGCAGTGGCGAATCCAACTGATCTTGTGAAAGTTAGACTTCAAGCAGAAGGAAAATTACCTCCTGGTGTGCCCAGGCGTTACTCTGGATCATTAAATGCTTATTCAACAATTGTGAGACAGGAAGGAGTTGGAGCACTTTGGACTGGGATTGGTCCCAACATAGCAAGAAATGGCATCATTAATGCTGCTGAACTAGCCAGCTATGATCAAGTAAAACAGACTATTTTGAAAATTCCTGGATTCACCGACAATGTTGTAACTCACCTTCTTGCTGGTCTAGGAGCAGGATTTTTTGCAGTCTGTGTTGGCTCCCCTGTTGATGTGGTTAAGTCGAGAATGATGGGAGATTCAAGTTACAAAAGCACCCTTGATTGTTTCGTTAAGACATTAAAAAATGATGGACCTTTTGCCTTTTATAAGGGGTTCATACCAAATTTTGGACGGCTAGGATCTTGGAATGTGATCATGTTTCTAACTCTAGAACAGGCTAAAAAGTTTGTCAAAACTTTAGAATCAGCTTGA 918 0.4314 MVAGGNSKSDISFAGTYASSAFAACFAEVCTLPLDTAKVRLQLQKQAVVGDVVTLPKYRGLLGTIGTIAREEGLSALWKGIVPGLHRQCLNGGLRIALYEPVKNFYVGPDHVGDVPLFKKILAGFTTGAMAIAVANPTDLVKVRLQAEGKLPPGVPRRYSGSLNAYSTIVRQEGVGALWTGIGPNIARNGIINAAELASYDQVKQTILKIPGFTDNVVTHLLAGLGAGFFAVCVGSPVDVVKSRMMGDSSYKSTLDCFVKTLKNDGPFAFYKGFIPNFGRLGSWNVIMFLTLEQAKKFVKTLESA 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01796 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 115 206 IPR018108 -
Gma18g01796 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 215 298 IPR018108 -
Gma18g01796 305 PANTHER MITOCHONDRIAL UNCOUPLING PROTEIN 1 5 299 - -
Gma18g01796 305 PRINTS Mitochondrial brown fat uncoupling protein signature 18 30 IPR002030 GO:0006839|GO:0031966
Gma18g01796 305 PRINTS Mitochondrial brown fat uncoupling protein signature 46 65 IPR002030 GO:0006839|GO:0031966
Gma18g01796 305 PRINTS Mitochondrial brown fat uncoupling protein signature 99 111 IPR002030 GO:0006839|GO:0031966
Gma18g01796 305 PRINTS Mitochondrial brown fat uncoupling protein signature 169 186 IPR002030 GO:0006839|GO:0031966
Gma18g01796 305 PRINTS Mitochondrial brown fat uncoupling protein signature 212 230 IPR002030 GO:0006839|GO:0031966
Gma18g01796 305 PRINTS Mitochondrial brown fat uncoupling protein signature 287 305 IPR002030 GO:0006839|GO:0031966
Gma18g01796 305 SUPERFAMILY Mitochondrial carrier 10 294 IPR023395 -
Gma18g01796 305 Gene3D Mitochondrial carrier domain 15 304 IPR023395 -
Gma18g01796 305 PANTHER MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED 5 299 - -
Gma18g01796 305 Pfam Mitochondrial carrier protein 216 300 IPR018108 -
Gma18g01796 305 Pfam Mitochondrial carrier protein 10 106 IPR018108 -
Gma18g01796 305 Pfam Mitochondrial carrier protein 114 209 IPR018108 -
Gma18g01796 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 105 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01796 Gma-Chr18 49963331 49968012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01796 1 305 Miscellaneous Gene Families AT3G54110 82.026 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01796 K15103 - gmx:100802540 609.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01796 18 49963331 49968012 Gma18g01796 18 49963331 49968012 ECH
Gma18g01796 18 49963331 49968012 Gma07g01324 07 17495963 17500093 GST
Gma18g01796 18 49963331 49968012 Gma03g00686 03 21674828 21680010 PCT