Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01316 ATGAAGTTTATGAAACTTGGATCTCGTTCGGACACCTTTTACACTGCAGAGTCTGTAAGGACAATCTCTTCTGAAGTTTCAAGTGACCTCATAATTCAAGTGAAAGGAACTAGATACCTACTTCACAAGTTTCCACTATTGTCCAAATGTTTGCGCCTGCAAAGGTTATGCTCAGAGAGTTCTGATTCTCCACAGCACCAAATAGTCCAACTCCCTGATTTTCCGGGTGGGGTGGAAGCATTTGAGCTGTGTGCCAAGTTCTGCTATGGCATAACCATCACTCTCAGTGCTTACAACATTGTGGCCGCGCGAAGCGCGGCCGAGTACTTGCAGATGACTGAGGATGTTGAGAAGGGGAATTTGATTTACAAGCTTGATGTTTTCTTCAACTCTTGCATCCTCAATGGCTGGAAGGATTCCATTGTGACTCTCCAAACCACAAAGGCATTGCCTTTGTGGTCAGAGGATTTGACAGTTTCCAGCAGATGCATTGAGGCCATTGCCTCAAAGGCCTTAAGCCACCCCTCAAAGGTGAGTTTGTCACACAGCCATTCCCGGAGATTGAGGAATGATGTGTCTTCATACAACGAAACCGAAAGCCTGAGACACAAATCAACAAGCAAGGGATGGTGGGCTGAGGATTTAGCAGATTTGAGCATAGACTTGTATTGGAGAACCATGATGGCTATCAAATCTGGTGGCAAGACACCCTCAAATCTCATTGGTGATGCATTGAAAATTTATGCATCTAGATGGCTACCAAATATAAGGAAGAATGTGCATAATGTCAAGAGGGAGACTGAATCAGACTCAGATTCAGATTCTGCTAGTGAAGTGAATTCAAAGCATAGGCTGCTTTTGGAATCAATAGTGAGCTTGCTTCCAGCAGAGAAAGGTGCTGTTTCTTGCAGCTTCCTTCTTAAGCTCTTGAAGGCTGCTAATATTCTCAATGCCTCTGCTTCTTCTAAAGTGGAATTGGCCACAAGAGTAGGACTTCAATTGGAGGAAGCAACGGTTAACGATCTTCTGATACGCTCGGTGTCTAAGAGTACTAATGATATGATGTATGAAGTGGACTTGGTGATGACCATATTGGAACAGTTCATGTTGCAAGGTCAGAGTCCTCCAACCAGCCCTCCAAGATCAAGGTTGGCCGTCGAAAGAAGGCGGTCTCGTTCCGCGGAGAATATTAACTTCGAGTTTCAAGAGAGTAGGAGGTCCTCCTCAGCTTCTCATAGCTCAAAACTTAAGGTGGCAAAGCTTGTGGATAGGTACCTTCAAGAGGTGGCCAGGGATGTGAATTTGGCTCTCTCAAAATTCATTGCTATTGCTGAAACTATACCAGATTTTGCAAGGCATGACCATGATGATCTGTACAGAGCTATTGACATTTACCTCAAGGCACATCCAGAACTCAGCAAGAGTGAAAGGAAGAGACTATGTAGAATTTTAGACTGCAAAAAACTGTCAATGGAAGCATGCATGCATGCAGCACAGAATGAGCTTCTTCCCCTAAGAGTTGTAGTCCAAGTTCTCTTCTTTGAGCAAGCAAGAGCAGCAGCAGCTGGTGGCAAAGTGAGTGACATGCCAAGCAACATCAAGGCATTGCTCACAGCTCATGGCATTGACCCTTCAAAGCACACAGCACCATTGAGCACCACGACTAGTATTCATGCTGATGACAATTGGAGTGTTTCTGGATTCAAGTCACCAAAGTCAACAACTAGGAACCCTACCCTCAGAATGAAGCTAGCTGAGGATGACTTGGATGAAAATGTTGTGCCCCGTGATGAGATTGGAAGAACTTCTAAATTTAAGGGTCTTGGTCTTCCCACTCAGCCCAAACGAATGTTTAGCAAGTTGTGGGCTACAAACAGAAGTGCCACTGAAAAGAATTGA 1899 0.446 MKFMKLGSRSDTFYTAESVRTISSEVSSDLIIQVKGTRYLLHKFPLLSKCLRLQRLCSESSDSPQHQIVQLPDFPGGVEAFELCAKFCYGITITLSAYNIVAARSAAEYLQMTEDVEKGNLIYKLDVFFNSCILNGWKDSIVTLQTTKALPLWSEDLTVSSRCIEAIASKALSHPSKVSLSHSHSRRLRNDVSSYNETESLRHKSTSKGWWAEDLADLSIDLYWRTMMAIKSGGKTPSNLIGDALKIYASRWLPNIRKNVHNVKRETESDSDSDSASEVNSKHRLLLESIVSLLPAEKGAVSCSFLLKLLKAANILNASASSKVELATRVGLQLEEATVNDLLIRSVSKSTNDMMYEVDLVMTILEQFMLQGQSPPTSPPRSRLAVERRRSRSAENINFEFQESRRSSSASHSSKLKVAKLVDRYLQEVARDVNLALSKFIAIAETIPDFARHDHDDLYRAIDIYLKAHPELSKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQARAAAAGGKVSDMPSNIKALLTAHGIDPSKHTAPLSTTTSIHADDNWSVSGFKSPKSTTRNPTLRMKLAEDDLDENVVPRDEIGRTSKFKGLGLPTQPKRMFSKLWATNRSATEKN 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01316 632 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 1 630 - -
Gma18g01316 632 ProSiteProfiles NPH3 domain profile. 209 518 IPR027356 -
Gma18g01316 632 PANTHER OS12G0117600 PROTEIN 1 630 IPR043454 -
Gma18g01316 632 Gene3D Potassium Channel Kv1.1; Chain A 14 118 IPR011333 -
Gma18g01316 632 SUPERFAMILY POZ domain 22 115 IPR011333 -
Gma18g01316 632 Pfam NPH3 family 210 494 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01316 Gma-Chr18 23618395 23621785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01316 26 542 EF-hand Containing Proteins AT3G44820 34.944 4.29e-91 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01316 - - gmx:100792829 1169.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01316 18 23618395 23621785 Gma18g01316 18 23618395 23621785 ECH