Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01266 ATGAGTGGCTTGAGTTTCAGGGGCTTCACATACATGCTCCTCATTGCATTTCTCATTTGGTCCTTCAATTTTGAAGCCTGCATTGCAAGAAGAGGCAAGCACTGGAGACAAAGCAGGGATGTCTCAGCTTCTGTGTACAAGAAAAAAGGCAAAAATTATGGCAATGCTCACAACAAGTACCATGGTGGAGGATCAAAATCAAAGCCTCCATCATCACACAAAGGCACACCAACATTACCAAAGGCTCCGCCACAACATAAAAACACTCCCTCACCACCATATCCAACACCACCAAGTGATGATACCCCCACAACTCCACCACCAAAGGCTTACAATGGTGGTGGCCATTCTTCCGCCACCACCTTCAATGTGCTAGATTTTGGAGCCAAGGGAGATGGAAAATCTGATGACACCAAGGCATTTCAAGAGGCTTGGGCTGAAGCTTGTAAAATTGAATCATCAACCATGCTCGTCCCAGCAGACTACGCATTCTTTGTAGGGCCCATTTCATTCTCGGGCCCATACTGTAAACCCAGCATCGTTTTCCAGCTTGATGGCACCATTGTTGCACCAACAAGCCCCAAAGCTTGGGGCAAAGGACTTCTACAGTGGTTGGAATTTTCCAAGTTGGTAGGAATTACCATCCAAGGAAATGGCATCATTGATGGAAGAGGCTCAGTGTGGTGGCAAGATAATCAATATGATGATCCTATAGATGATGAAGAAAAGCTCATTGTCCCTTTAAACCACACAGTAGGGAGCCCAAGTCCCCCACTGCCGATTCAAAGTGAGATGGGAGGAAAAATGCCATCCGTCAAGCCAACTGCATTGCGGTTCTATGGGAGTTTTAATCCAACAGTTACAGGCATTACAATTCAAAATAGTCCACAATGCCACCTCAAGTTTGACAACTGTAATGGGGTCATGGTCCATGATGTGACCATATCATCTCCTGGGGACAGTCCTAACACAGATGGAATTCACCTTCAGAACTCCAAAGATGTGTTGATATACAGCAGCTCTATGGCCTGCGGAGATGACTGTATTTCGATACAAACTGGATGCTCGAACATATATGTACACAATGTCAACTGTGGACCAGGGCATGGAATCAGCATTGGAAAATCAAAACATGGCAGGGTGGATCAGGTTCTGTACAAGGAGTGCTATTCTCAAACATACAAGTTTCTGAAGTTGAACTCCCAATTGTGA 1212 0.453 MSGLSFRGFTYMLLIAFLIWSFNFEACIARRGKHWRQSRDVSASVYKKKGKNYGNAHNKYHGGGSKSKPPSSHKGTPTLPKAPPQHKNTPSPPYPTPPSDDTPTTPPPKAYNGGGHSSATTFNVLDFGAKGDGKSDDTKAFQEAWAEACKIESSTMLVPADYAFFVGPISFSGPYCKPSIVFQLDGTIVAPTSPKAWGKGLLQWLEFSKLVGITIQGNGIIDGRGSVWWQDNQYDDPIDDEEKLIVPLNHTVGSPSPPLPIQSEMGGKMPSVKPTALRFYGSFNPTVTGITIQNSPQCHLKFDNCNGVMVHDVTISSPGDSPNTDGIHLQNSKDVLIYSSSMACGDDCISIQTGCSNIYVHNVNCGPGHGISIGKSKHGRVDQVLYKECYSQTYKFLKLNSQL 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01266 403 MobiDBLite consensus disorder prediction 46 115 - -
Gma18g01266 403 Gene3D - 113 395 IPR012334 -
Gma18g01266 403 Pfam Glycosyl hydrolases family 28 272 384 IPR000743 GO:0004650|GO:0005975
Gma18g01266 403 Pfam Glycosyl hydrolases family 28 151 232 IPR000743 GO:0004650|GO:0005975
Gma18g01266 403 PANTHER PECTIN LYASE-LIKE SUPERFAMILY PROTEIN 6 375 - -
Gma18g01266 403 SMART pbh1 355 375 IPR006626 -
Gma18g01266 403 SMART pbh1 332 353 IPR006626 -
Gma18g01266 403 SMART pbh1 305 331 IPR006626 -
Gma18g01266 403 SMART pbh1 210 231 IPR006626 -
Gma18g01266 403 PANTHER - 6 375 - -
Gma18g01266 403 MobiDBLite consensus disorder prediction 83 105 - -
Gma18g01266 403 SUPERFAMILY Pectin lyase-like 119 390 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01266 Gma-Chr18 21050096 21054959 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01266 4 374 Glycoside Hydrolase AT1G60590 59.043 5.39e-145 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01266 - - gmx:100783813 754.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01266 18 21050096 21054959 Gma18g01266 18 21050096 21054959 ECH