Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01235 ATGTTTGGTCATAAATGCAGTGTCTGGGTTGCTCGTAGACCACCAGGATATGCATTTATTGAGTTTGATGATCGGAGGGATGCACTTGATGCAATTCAGGCCTTGGATGGAAAAAATGGTTGGCGTGTAGAGCTTTCTCATAATTCCAAGGGTGGTGGCCGAGGAGGGCGTGGGCGTGGAGGTGAAGGCACAAAATGCTATGAATGTGGTGAACCTGGACACTTTGCTCGGGAGTGTCGATTGCGCATTGGATCACGTGGCCTTGGAAGTGGAAGGAGGCGAAGTCCAAGTCCTTATCGGCGTCGTAGAAGTCCAAGTTATGGGTATGATCGCAGGAGTTACAGCCCTCGTGGGAGAAGATCTCCAAGACGACGTAGCATATCGCTTCCCCGGGGTCGCAGCTATAGCAGGTCCCCTCCATATCGTCCTTCTCGCCATGATTCACCTTATGCCAATGCAATGTGA 465 0.5118 MFGHKCSVWVARRPPGYAFIEFDDRRDALDAIQALDGKNGWRVELSHNSKGGGRGGRGRGGEGTKCYECGEPGHFARECRLRIGSRGLGSGRRRSPSPYRRRRSPSYGYDRRSYSPRGRRSPRRRSISLPRGRSYSRSPPYRPSRHDSPYANAM 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01235 154 SMART c2hcfinal6 65 81 IPR001878 GO:0003676|GO:0008270
Gma18g01235 154 Pfam Zinc knuckle 65 80 IPR001878 GO:0003676|GO:0008270
Gma18g01235 154 Gene3D - 53 126 - -
Gma18g01235 154 MobiDBLite consensus disorder prediction 85 154 - -
Gma18g01235 154 Gene3D - 1 46 IPR012677 -
Gma18g01235 154 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 2 152 - -
Gma18g01235 154 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 1 50 IPR000504 GO:0003723
Gma18g01235 154 SUPERFAMILY RNA-binding domain, RBD 2 60 IPR035979 GO:0003676
Gma18g01235 154 ProSiteProfiles Zinc finger CCHC-type profile. 65 80 IPR001878 GO:0003676|GO:0008270
Gma18g01235 154 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 2 38 IPR000504 GO:0003723
Gma18g01235 154 MobiDBLite consensus disorder prediction 44 64 - -
Gma18g01235 154 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR RSZ21A-LIKE ISOFORM X1 2 152 - -
Gma18g01235 154 SUPERFAMILY Retrovirus zinc finger-like domains 55 82 IPR036875 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01235 Gma-Chr18 20036883 20038924 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01235 K12896 - gmx:100776329 174.866
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01235 18 20036883 20038924 Gma18g01235 18 20036883 20038924 ECH