Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01192 ATGGACCATCATCTAAGACTTATTCTCCTACTCTTCCTGTTTCTACCCACCACCTGCTTCTCTTTCTCATTTCAAACTCCTTCAAGCAATAATGAATTCTCGAATCAAAGTTCTTCTCTGAAGCAGCAGATTCTGGAGCTAGCTAATAGTCCCAGAACGGTGAAATGGATGAAGAGAATAAGGAGGGAAATCCATGAGCACCCAGAACTTGCATATGAAGAGTTCAGAACAAGTGCTATCATAAGGCGTGAGCTTGACCTGTTGGGTGTTGGTTACAAGTGGCCTGTGGCTGGGACTGGTGTGGTGGCAAAAATTGGTTCTGGGTCTCCTCCTTTTGTTGCTCTTAGAGCAGACATGGATGCTTTGCCAATTCAGGAAATGGTTGATTGGGATCATAAGAGCAAAGTAGATGGAAAAATGCATGCTTGCGCACACGATGCACATGTTGCCATGCTACTTGGGGCTGCAAAGATACTGCAAGAAATGCAAGACATGTTACAGACTACTGTTGTTCTAATATTCCAACCAGCTGAGGAAAGAGGCACAGGTGCAAAAGACATGATCCAAGAACAGGTGCTTCAAGATGTTGGGGCTATTCTTGGATTGCACTTAGGAGCAGCGTATCCCACAGGTGTCGTTGCATCACGGCCAGGAGAATTTTTAGCCGGGTGTGGAAGCTTCAAAGCAAAGATCAATGGAAAAGGGGGGTTAGCAGGAGTTCCCCATCATTGTTTTGATCCAGTTTTGGCTGCTTCAACGTCAGTGATCAGCTTGCAAAACATTGTTTCAAGGGAGGCTGATCCTTTAGATTCTCAGGTGCTTTCTGTGGCCATGATCCATGCAGGGTCTGCTCATGACATAATCCCTGATTCAGCTACATTTGGAGGTACTTATAGAGCATTCAGCAAAAAGAGCTTCTATGGACTGAGGAAAAGAATAGAAGAGGTTATTAAAGGGCAGGCTGAAGTACATAGATGCTCTGGAGAGGTTGAGTTCTTTGGCAATGAACATCCCACAATCCCTCCAACCACAAATGATGTGAGAATATACCAACTAGCACGGCTAGTGTCTAGCAAGATTGTTGGAGAAGATAACATAGAATTAGCACCCCTCTTCACAGGGAGTGAAGATTTTGCATTTTACTTGGAAAAGGTACCCGGGTCATTCGTTCTAGTGGGTACAAGAAATGAGAAGAGTGGATCCATACATCCTGCTCATAGTCCTTACTTTTTCATTGATGAAGATGTGCTTCCCATCGGGGCTGCAATACATGCAGCATTTGCTCTTTCATTCAATTCATATTCAACAAATTCATTCCTTTTGTAA 1326 0.4389 MDHHLRLILLLFLFLPTTCFSFSFQTPSSNNEFSNQSSSLKQQILELANSPRTVKWMKRIRREIHEHPELAYEEFRTSAIIRRELDLLGVGYKWPVAGTGVVAKIGSGSPPFVALRADMDALPIQEMVDWDHKSKVDGKMHACAHDAHVAMLLGAAKILQEMQDMLQTTVVLIFQPAEERGTGAKDMIQEQVLQDVGAILGLHLGAAYPTGVVASRPGEFLAGCGSFKAKINGKGGLAGVPHHCFDPVLAASTSVISLQNIVSREADPLDSQVLSVAMIHAGSAHDIIPDSATFGGTYRAFSKKSFYGLRKRIEEVIKGQAEVHRCSGEVEFFGNEHPTIPPTTNDVRIYQLARLVSSKIVGEDNIELAPLFTGSEDFAFYLEKVPGSFVLVGTRNEKSGSIHPAHSPYFFIDEDVLPIGAAIHAAFALSFNSYSTNSFLL 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01192 441 Gene3D Zn peptidases 59 417 - -
Gma18g01192 441 SUPERFAMILY Zn-dependent exopeptidases 54 431 - -
Gma18g01192 441 PANTHER PEPTIDASE M20 FAMILY MEMBER 3 439 IPR017439 GO:0016787
Gma18g01192 441 CDD M20_IAA_Hyd 57 431 IPR044757 GO:0009850|GO:0016787
Gma18g01192 441 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 2 3 439 - -
Gma18g01192 441 SUPERFAMILY Bacterial exopeptidase dimerisation domain 222 341 IPR036264 -
Gma18g01192 441 TIGRFAM amidohydrolases: amidohydrolase 58 420 IPR017439 GO:0016787
Gma18g01192 441 PIRSF Amidohydrol_AmhX 42 435 IPR017439 GO:0016787
Gma18g01192 441 Pfam Peptidase family M20/M25/M40 114 428 IPR002933 GO:0016787
Gma18g01192 441 Pfam Peptidase dimerisation domain 223 321 IPR011650 -
Gma18g01192 441 Gene3D - 222 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01192 Gma-Chr18 18428441 18431544 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01192 K14664 - gmx:100788267 859.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01192 18 18428441 18431544 Gma18g01192 18 18428441 18431544 ECH