Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01186 ATGCCTCCTCGCATTCAATTCCACGCTCTGGTGGCATCATCATCATGGATCGTGGTAATAACAACAATAACGGCGTTGTTGTTGTTGTCGTTTGGGTGCGAACGGGGACACGCTCTGAAGGTGCCGTTTAGAGTAAACGACGTGCTCCCCGTGCTGCCGCGCGAGATCTCGTGGCCGGTTCTGAACAACCTGCACAGCGCCGTCGACCTGCTCCCTTATTTCGTTGGGTCCCTCACTCCTGCCAATGCCTCCGTCAAGTGGAAAGGGGCATGCTTCTTCGATAACACCGCCAAGATTGAGTTCGCACCCTCTTTGGAGGGTGCCACTCTCTATCTCAAGACAGAGGCTGCACATAGCTGGACCTGCATGGATTTGTATGTTTTTGCAACACCCTACAGGATTACTTGGGACTACTACTTCTCTTCACGAGAACATACCTTGAAGTTTGACTCGTGGGAAGAGCCTGCAGAGTTGGAATATGTGAAGCAGCATGGGGTTTCTGTGTTTCTCATGCCATCCGGGATGCTTGGAACTCTGCTTTCTCTGATTGATGTTTTGCCTTTGTTCTCGAACACTGGTTGGGGTCAGAAAGCCAACCTGGATTTTCTGAAGAAACACATGGGAGCTACATTTGAGAAGCGCAGCCAGCCTTGGCGTGCATATATAGATCCTGCAGATGTTCATTCAGGAGACTTCTTAGCTGTGTCGAAGATCCGGGGTAGGTGGGGAGGTTTTGAGACGCTAGAAAAGTGGGTTACTGGTTCATTCGCTGGTCATACTGCGGTTTGCTTGAAGGATGAATGGGGCAATTTATGGGTTGGTGAATCAGGGCACGAGAATGAAAAGGGTGAAGAAATAATAGTGGTAATTCCCTGGGAAGAATGGTGGGAATTGGCTCTTAAGGATGATTCCAATCCACAGATAGCCTTACTTCCCCTGCATCCAGAAATACGAGCAAAATTTAACTCCACTGCAGCATGGGAATATGCCCGGAGCATGTCTGGCAAGCCATATGGTTATCACAATATGATATTCAGTTGGATTGACACTGTAGCAGACAACTATCCTCCACCTCTTGATGCTCACTTGGTAATTTCTGTCATGTCTATGTGGACTAGATTGCAGCCAGCTTATTCGGCAAATATGTGGAATGAAGCATTGAATAAGCGGTTAGGGACTGAGGGTTTGGATTTGCATGATATTTTAGTAGAGACTGAGAAGCGTGGGATACCTTTTGATGAATTACTCACCATTCCAGAACAAGATGAATGGGTATACAGTGATGGAAAGTCGACAACTTGTGTTGCCTTTATCCTTTCTATGTATAAAGAGGCTGAAGTTTTTGGTCCCATTGCTAATTCCATTCAAGTAACCGAGTTCACCATTCGCGATGCATACATGCTCAGAATTTTCGAGGACAACCAAACACGCCTACCAAGTTGGTGCAACAATGAGAATGACCGGATTCCATTCTGTCAGATTCTTGGTGAATACAAGATGGAACTGCCTGGCTATAACACCTTGGAGCCATATGCCAACATGAATGAGTATTGCCCTTCTCTTCCTCCAACTTATGATAGGCCTTCTCGATGTTAG 1596 0.4674 MPPRIQFHALVASSSWIVVITTITALLLLSFGCERGHALKVPFRVNDVLPVLPREISWPVLNNLHSAVDLLPYFVGSLTPANASVKWKGACFFDNTAKIEFAPSLEGATLYLKTEAAHSWTCMDLYVFATPYRITWDYYFSSREHTLKFDSWEEPAELEYVKQHGVSVFLMPSGMLGTLLSLIDVLPLFSNTGWGQKANLDFLKKHMGATFEKRSQPWRAYIDPADVHSGDFLAVSKIRGRWGGFETLEKWVTGSFAGHTAVCLKDEWGNLWVGESGHENEKGEEIIVVIPWEEWWELALKDDSNPQIALLPLHPEIRAKFNSTAAWEYARSMSGKPYGYHNMIFSWIDTVADNYPPPLDAHLVISVMSMWTRLQPAYSANMWNEALNKRLGTEGLDLHDILVETEKRGIPFDELLTIPEQDEWVYSDGKSTTCVAFILSMYKEAEVFGPIANSIQVTEFTIRDAYMLRIFEDNQTRLPSWCNNENDRIPFCQILGEYKMELPGYNTLEPYANMNEYCPSLPPTYDRPSRC 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01186 531 Gene3D endopeptidase domain like (from Nostoc punctiforme) 226 355 - -
Gma18g01186 531 PANTHER OS01G0793500 PROTEIN 23 531 - -
Gma18g01186 531 PANTHER ZINC FINGER MYND DOMAIN PROTEIN 23 531 - -
Gma18g01186 531 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01186 Gma-Chr18 18273704 18278737 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01186 - - gmx:100815535 1100.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01186 18 18273704 18278737 Gma18g01186 18 18273704 18278737 ECH