Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01178 ATGAACTTGCTTGAATGTGAAGATGACAGGATTGAACTTGACGTGTGTTTAGAGACTGCAAAATCGACAACTAAGCAAGTTGAAGAGCTCATAGAAAAGATTAATACCAATATGATTGAAAGAGACAATCCAATTAATATTGAGAAGCACTTAAGAGCTCAAAATCTTAGGTGGATTGAGCAGTTATATGGCGACCATGGGATTGATGTGCTGGATGTATTAAGGAAGAATGCATCTCGAGTTTTGCCAGTCATTTTAACCAGGTTGAAGCAGAAACAGGAAGAATGGGCAAGATGTGGTGCTGATTTAAATAAACTTTGGGCTGAAGTATATGCTAAAAACTATCATAAATCACTTAATCATCGTGTTCCTTCTACTAGGAACCAAGAGCTTTAG 396 0.3712 MNLLECEDDRIELDVCLETAKSTTKQVEELIEKINTNMIERDNPINIEKHLRAQNLRWIEQLYGDHGIDVLDVLRKNASRVLPVILTRLKQKQEEWARCGADLNKLWAEVYAKNYHKSLNHRVPSTRNQEL 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01178 131 Coils Coil 17 37 - -
Gma18g01178 131 PANTHER SIN3B-RELATED 3 123 IPR039774 GO:0003714
Gma18g01178 131 PANTHER PAIRED AMPHIPATHIC HELIX PROTEIN SIN3-LIKE 6 3 123 - -
Gma18g01178 131 Pfam Sin3 family co-repressor 2 38 IPR013194 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01178 Gma-Chr18 18023237 18023945 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01178 K11644 - gsj:114395854 266.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01178 18 18023237 18023945 Gma18g01178 18 18023237 18023945 ECH