Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01142 ATGGATCCCTCCTCTTCGCTCCCTCCCTCTCTTCACCTCGCCATTGCCGCGCTGCTCGGCGCTTCCTTCATGGCCCTCTCTGCCTTCTACATCCACCGCCACACCGTCGACCACGTCCTCCACCGCCTCGTCGAACTCCGCCGCAAACCTCTCGCCACCTCCGACGACGAAGACGACGACGGAGAAGCGGAAACAGACGCCGATCTGAGAAACTATCTCGGAGCCTTGTCGAGGTCCGTCGACGACAGCTCGAACGTGCTTCGGAGCTACAGGATTTCGTCTTCCATGCCGAACGTGGTCTCCGCCACGGACTGGTTCGGAGAGGACGCTAAGACTTCGTCGCTGGAAAATCTCCAATTCGTTCCGTCGGGGCTTCCGTCTCTTCGAACTGGTTCCAAGAATGGAGAGAGTGCTCAGATTTCTTCGTGTTCATATAAGAGGATAAGTTCTGTTGGCAGAATTATGACCCTGAGATCACCGGGGCGTACCACGTCTGAAAGTGCTGAGGATTCTGATGAGGAGGAAACACAGTTTGCTGATGACAATCGAATTCCTTTCTCAAATACTTACGGACTAAATTCAAATGTCTGCAATTTGCCCGCTATTCCATTCAGAGTTGAGGATGCAAACAATGAAAAAAATCAGATGTATAGAGAGGCTTCAAAGGAAGTGAAAGCTGGTGCCGATATGAATGGTCATGGAATAACAGATTCAACTTCAGTACATGTAGCTGGGGATGACCTTGTGTTTGTCAATAATGTCTTGTCTGCAAGAAATACTGTGAATGAGACAACAAATATAGAAGAGGAGGAAGTATACAAAATGATTCGAGAATGCTTAGATTTGCGTAAGAAATATGTTTACAAGGATGTTCCATGGAAGACTGAACCTGTGGAAACTAACTCTGACCCGTATCATTTTGAACCTGTTGAAGCAACAGCGCACCACTTTAGGATGGAAGATGGAGTCATACATGTTTTTGCAAGTAAAACTGACACTGATGAGCTCTTCCCTGTTGCAAGCTCAACGAGATTTTTCACCGATATGCATTACATTCTAAAAGTTATGTCTATTGGGAATAAATTCCGTCTTCATCTGTTACTAAATGCAGATAGGGAGTTTCTGGCTCAGAAGGGTGCACCACACCGGGATTTTTACAATATCAGGAAAGTTGATACTCATATTCATCATTCTGCTTGCATGAATCAGAAGCATCTTGTTGTTATCTTTAGAGATGGAAAGTATATGATGCTTAAGGAGGTTTTTGAGAGTTTGGATTTGACTGGATATGATTTGAATGTTGATTTGTTGGACGTCCATGCAGATAATAGCACATTCCATAGATTTGACAAATTCAACCTTATGTATAATCCTTGTGGACAGAGCAGACTAAGAGAAATATTTTTAAAGCAGGATAATCTTATCCAGGGTTGGTTTCTGGCTGAAGTAAGAAAGGAAGTTTTGACAGATCTTGAAGcaagcaaatatcagATGGCTGAGTACAGGATCTCTGTTTATGGAAGAAAACAGAGTGAGTGGGGTCAGCTGGCTAGTTGGTTTGTTAACAATGCTCTTTATAGTAAGAATGCCGTATGGCTAATCCAGTTACCACGGTTATACAATGTGTACAAGAATATGGGAATTGTTACCTCCTTTCAGAATATTCTGGATAATGTGTTTATTCCTCTATTTGAAGTCGCTGTGGATCCTAATTCTCATCCTCAATTACATTTGTTTTTGAAGCAGGTGGTGGGATTTGATCTTGTAGATGATGAAAGTAAACCCGAAAGGCGTCCAACTAAGCACATGCCTACTCCATCTGAGTGGACAAATGAATTCAATCCAGCATACTCTTATTACCTTTATTACTACTATGCTAACTTGTATACACTCAACAAGCTGCGTGAATCTAAAGGAATGACCACAATAAAGTTGCGGCCTCACTGTGGAGAGGCAGGTGATAGTGATCATTTGGCTGCTGCCTTCCTCCTATGCCATAACATTTCTCATGGGATTAATCTGCATAAAACTCCAGTTTTGCAGTACTTGTATTATCTTGCACAGGTTGGATTAGCTATGTCACCACTTAGCAATAATTCTCTTTTCTTGAACTATAAACGCAATCCATTACCAATGTTTTTCCAGCTAGGTCTAAATGTGTCTCTCTCTACCGATGATCCTTTGCAAATTCATTTGACAAAAGAGCCACTGCTCGAAGAATATAATGTTGCAGCAAAGGTATGGAAGCTCTCTGCATGTGACCTGTGTGAGATAGCTAGAAATTCTGTCTACCAATCTGGATTTTCACACCAAGCAAAGTCACACTGGCTTGGGGATAAATATTTGTTGAGAGGTTCCGAAGGAATTGATATTCACAAGACAAATGTTCCCAATTTGAGGATTTCTTTCCGATATGAGCAGCAGCTTTGA 2430 0.4243 MDPSSSLPPSLHLAIAALLGASFMALSAFYIHRHTVDHVLHRLVELRRKPLATSDDEDDDGEAETDADLRNYLGALSRSVDDSSNVLRSYRISSSMPNVVSATDWFGEDAKTSSLENLQFVPSGLPSLRTGSKNGESAQISSCSYKRISSVGRIMTLRSPGRTTSESAEDSDEEETQFADDNRIPFSNTYGLNSNVCNLPAIPFRVEDANNEKNQMYREASKEVKAGADMNGHGITDSTSVHVAGDDLVFVNNVLSARNTVNETTNIEEEEVYKMIRECLDLRKKYVYKDVPWKTEPVETNSDPYHFEPVEATAHHFRMEDGVIHVFASKTDTDELFPVASSTRFFTDMHYILKVMSIGNKFRLHLLLNADREFLAQKGAPHRDFYNIRKVDTHIHHSACMNQKHLVVIFRDGKYMMLKEVFESLDLTGYDLNVDLLDVHADNSTFHRFDKFNLMYNPCGQSRLREIFLKQDNLIQGWFLAEVRKEVLTDLEASKYQMAEYRISVYGRKQSEWGQLASWFVNNALYSKNAVWLIQLPRLYNVYKNMGIVTSFQNILDNVFIPLFEVAVDPNSHPQLHLFLKQVVGFDLVDDESKPERRPTKHMPTPSEWTNEFNPAYSYYLYYYYANLYTLNKLRESKGMTTIKLRPHCGEAGDSDHLAAAFLLCHNISHGINLHKTPVLQYLYYLAQVGLAMSPLSNNSLFLNYKRNPLPMFFQLGLNVSLSTDDPLQIHLTKEPLLEEYNVAAKVWKLSACDLCEIARNSVYQSGFSHQAKSHWLGDKYLLRGSEGIDIHKTNVPNLRISFRYEQQL 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01142 809 PANTHER AMP DEAMINASE 10 805 IPR006329 GO:0003876|GO:0032264
Gma18g01142 809 Gene3D - 401 477 - -
Gma18g01142 809 ProSitePatterns Adenosine and AMP deaminase signature. 721 727 IPR006650 GO:0009168|GO:0019239
Gma18g01142 809 SUPERFAMILY Metallo-dependent hydrolases 254 807 IPR032466 -
Gma18g01142 809 Pfam AMP deaminase 287 806 IPR006329 GO:0003876|GO:0032264
Gma18g01142 809 MobiDBLite consensus disorder prediction 157 184 - -
Gma18g01142 809 PANTHER AMP DEAMINASE 10 805 - -
Gma18g01142 809 TIGRFAM AMP_deaminase: AMP deaminase 344 806 IPR006329 GO:0003876|GO:0032264
Gma18g01142 809 Gene3D - 315 806 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01142 Gma-Chr18 17021495 17034938 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01142 K01490 - gmx:100793831 1446.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01142 18 17021495 17034938 Gma18g01142 18 17021495 17034938 ECH