Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01077 ATGGCAGATGATGATGCATTGCCGGAGCATAAAAGCAAAGGGCGTGTGTCGCTTTATGAATCAAACATCACGATCCGCACACTTTGCCGGCGGCGGCCACAGAGGCGAGCAGAGCAGAGCAGAGTGGGCAACAAGCGAAGAATGGCGACGGAGATGGAAGAACTCGTCTCCTTTCTTTCTTCCCCATCGCCACAGATCAGAAAAGCCGCCGTTGACATAGTTCGCGGCTTAACCGGCTCCGTCGAGGGCTTGCAGTCCCTCGCCAATTACTCAAACGCCCTCTTACCCGCCTTGTCTCGCCTCTTAACGTTACCCAAGGAGGTTTCGGAGGCTGCTGCGGAGGCGCTGGTGAACCTGTCGCAGAACTCGAGCCTCGCGGAGGTGATGGTTCGAATGGGACTGGTCAAAACGGCGATGGATGTTCTGTACAAGCCCGACTGCGGCATTGCTCGCTTGCTTGTCATGCTTTTGGTCAACCTCACTCAACTCGAAGCTGGTGCTGCTTCCTTGCTTCAGACTGAAGATGAGAAGGTGCTTGGATTATATGTTATTAAGCTTGTGAGATCATTTTGTAGAACCACCCATGAGAATAATGATGATGCTTTTGAACATGTTGGTTCAATACTTGTTAACATCTCAAAACAGCGGAAAGGGAGGGAGCTTCTACTTGACCCAAAACGGGGTCTCTTAAAGCAGATAATCAGACAGTTTGATTCCAACAGTTCATTGAGAAAGAAAGGGGTCTCTGGAACTATTCGCAACTGTTGTTTTGAAGCTGAGAATCAGCTACAAAATTTGCTTTTGGTATCAGAGTTTCTCTGGCCCGCATTACTTCTTCCTGTAGCTGGCAACAAGATCTACAGTGAGCAAGACAGATCGAAAATGCCACTTGAACTTGGGACTGCACTCTCGATTGAACGTGAACTAGTTAATGATCCAGAAATTCGTATTCAGGCATTGGAAGCCATATACTTGATCATATTGCAGGAGGCAGGTCGAAGAGCCTTTTGGTCTGTAAATGGACCTAGAATAGTACAAATCGGCTACGAAGATGAGGAAGATCCAAAGGTGATGGAAGCATATGAACAATTGGGATCTTTGTTGGTTCACAGCAGCAGTGCGGAGGAACCATCCAGTCAGACCACAAAGTAG 1152 0.4818 MADDDALPEHKSKGRVSLYESNITIRTLCRRRPQRRAEQSRVGNKRRMATEMEELVSFLSSPSPQIRKAAVDIVRGLTGSVEGLQSLANYSNALLPALSRLLTLPKEVSEAAAEALVNLSQNSSLAEVMVRMGLVKTAMDVLYKPDCGIARLLVMLLVNLTQLEAGAASLLQTEDEKVLGLYVIKLVRSFCRTTHENNDDAFEHVGSILVNISKQRKGRELLLDPKRGLLKQIIRQFDSNSSLRKKGVSGTIRNCCFEAENQLQNLLLVSEFLWPALLLPVAGNKIYSEQDRSKMPLELGTALSIERELVNDPEIRIQALEAIYLIILQEAGRRAFWSVNGPRIVQIGYEDEEDPKVMEAYEQLGSLLVHSSSAEEPSSQTTK 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01077 383 Pfam Domain of unknown function (DUF383) 144 316 IPR007205 -
Gma18g01077 383 SUPERFAMILY ARM repeat 49 375 IPR016024 -
Gma18g01077 383 Pfam Domain of unknown function (DUF384) 322 375 IPR007206 -
Gma18g01077 383 PANTHER PROTEIN HGH1 HOMOLOG 48 377 IPR039717 -
Gma18g01077 383 Gene3D - 43 376 IPR011989 -
Gma18g01077 383 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 93 134 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01077 Gma-Chr18 14901448 14911713 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01077 - - gmx:100793520 634.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01077 18 14901448 14911713 Gma18g01077 18 14901448 14911713 ECH