Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00879 ATGATCGCATGGACGAAGCAGCTGAATGCTGCATTTGGGGCCTCGTTTCTTTGGCTGATTTGCTTAATTTACTTCACTCAGGGTTTTAGGTCTTTTGTATGGACATCAATTTCCTACCAGCTTAAAGATAATCTTAAGTTGTCACCCTCAGCTTCCCAATTTGTGTTTTCTGTAGCATTTTTCCCATGGAGCATTAAACCATTATATGGAATACTTTCTGATTGTATTCCAATTAAAGGAAGAAAACGGATTCCCTACTTAGTGATTGCAACTGTTCTCTCCCTAGTGCCATGGCTTATTTTAGGCTTAATTTCAACCTTGAGGGATTCAACATGGCACCTTATGGTATTGTTGACTGCACAAAACTTGGGTTCAGCAATGGCAGATGTTGTTGTTGATGCAATGATAGCTGAGGCAGTAAGATATGAACGGGCATCATTTGCAGGAGATCTCCAGTCGATATCTTGGTCTTCTATGGCTTTGGGAGGAATATGTGGGAGTTTGTTAGGAGGATATGCATTATCCAATTTACGGATAGATACTATTTTTCTTCTGTTTTGTGTACTACCATGCATACAGTTATTATCATGTTGTTTTGTGGAGGAAAAATCTGAAAATACCAAAGCTGAACCAGAGGATTCAATTGTAAGGGATTCACATATGAATGGTAGTACCCTAGATGAAGATAGTCCTTTAAGCAAAAAGTCCCACAGTAGCACAAGAAGAAGAAAGAAGGGCAAAAAGAACGCAAAAGGTAGAGCAGTAAATAGCAGCAAATCAAAGATTTATAAGAAAGGAGACTCCCTGGCATTAAAGTGGTTCCATTCTTTGAAAGAAGCAATTTATGATTTATGCCGTGCATTTAGACAGCCAATGATTTGGAGACCTATGTCTTGGTTTTTCCTTGCCCATGTTACGATTCCAAATCTTTCAACCGTCATCTTCTATTACGAAACCGAGGTTTTAAAGCTAGAAGCATCTTTCCTTGGGACTTCACGGGTTGTTGGTTGGTTGGGACTTATGATGGGCACCTTCATTTATAATCGTCACCTAAAGTATATGACCCTACGAAAAATCCTCATGTGTGCCCATATTGGTTTGGCATTCTTGAATCTTCTGCAGATTGCTGTAGTGTCAAGGAAAAATATTGCCTTTGGCATCTCAGACAAGATTATGGTCCTTTTTGGCTCGGCTCTTGCTGATGGAATCAATCAATTCAAGTTTATGCCTTTCCTGATCTTGTCTGGGCAACTATGTCCTCCAGGAATTGAAGGGACTTTATTTGCACTTTTCATGTCAATAAACAACTTGGGATCCACACTGGGGTCTTTTGTGGGTGCTGGCTTGGCATCCATATTGAACATTGATTCAGGATCATTTGACAATCTTCTCTTGGGCATCATTGTTCATGCCTTGTGCAATTTCATCCCAATTGCTTTTCTGTTTCTGATACCAAAGGAAGCCACAGGTTCTTCAACATAA 1482 0.3981 MIAWTKQLNAAFGASFLWLICLIYFTQGFRSFVWTSISYQLKDNLKLSPSASQFVFSVAFFPWSIKPLYGILSDCIPIKGRKRIPYLVIATVLSLVPWLILGLISTLRDSTWHLMVLLTAQNLGSAMADVVVDAMIAEAVRYERASFAGDLQSISWSSMALGGICGSLLGGYALSNLRIDTIFLLFCVLPCIQLLSCCFVEEKSENTKAEPEDSIVRDSHMNGSTLDEDSPLSKKSHSSTRRRKKGKKNAKGRAVNSSKSKIYKKGDSLALKWFHSLKEAIYDLCRAFRQPMIWRPMSWFFLAHVTIPNLSTVIFYYETEVLKLEASFLGTSRVVGWLGLMMGTFIYNRHLKYMTLRKILMCAHIGLAFLNLLQIAVVSRKNIAFGISDKIMVLFGSALADGINQFKFMPFLILSGQLCPPGIEGTLFALFMSINNLGSTLGSFVGAGLASILNIDSGSFDNLLLGIIVHALCNFIPIAFLFLIPKEATGSST 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00879 493 SUPERFAMILY MFS general substrate transporter 17 487 IPR036259 -
Gma18g00879 493 Gene3D MFS general substrate transporter like domains 14 481 IPR036259 -
Gma18g00879 493 MobiDBLite consensus disorder prediction 237 254 - -
Gma18g00879 493 PANTHER FOLATE-BIOPTERIN TRANSPORTER 4-RELATED 1 493 - -
Gma18g00879 493 Pfam BT1 family 27 487 IPR039309 -
Gma18g00879 493 TIGRFAM fbt: folate/biopterin transporter 18 486 IPR004324 GO:0016021
Gma18g00879 493 CDD MFS_FBT 18 482 - -
Gma18g00879 493 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 1 493 IPR039309 -
Gma18g00879 493 MobiDBLite consensus disorder prediction 210 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00879 Gma-Chr18 10269016 10273523 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00879 - - gmx:100796680 944.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00879 18 10269016 10273523 Gma18g00879 18 10269016 10273523 ECH
Gma18g00879 18 10269016 10273523 Gma08g02952 08 46013218 46018139 GST