Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00873 ATGGGTTGCAGAAACAGGGACTCAATCACAGAGAATCACACTTCGTCATCATCATCTTCTTCTGATTCACTCAGTGAAGCCTTGCTTTTCACCACCATGTGCATCGTTGGCCACCCCGTCGATGTTCACGTTAAGGATGGCTCTGTCTATTCTGGAATCTTCCACACTGCTTCTGTTCACGCCGACTACGGTATTGTTTTGAAGAAAGCAAGGATGACCAAGAAGGGAAAGGGCAACAATAATGTCGGAAATGAGGGCTTCGTGGATACATTAGTGATTCTATCCAGTGATCTTGTGCAAGTTGTAGCTAAGGGAGTAATGCTTCATGCAGATGTTGTTGGTGGAAACATAACTGGTGGCGATGAGGAAGCAGTTGCGCATAATGTTTGTTCCGAGAGTCTAACGTGTGAGGTAGAGAATCATACAGGGCCTTTGATGGACACAAAACAGGTTAATCACTCAAGACAAGCCGGAGACGACAAGTCAAACTCAAACGGGAAAACTGATAACTGCGGAGAGAAGTCTGAGTTTGTTAATGAAAAAACTGATGAAAAGATTCAAAGCCTCAATTCAAGCCATGAAAGCCAAGAGGTAGCTGTTGAGCATGGAAGTACAGATAGGACATCAATTCCTTCTGATAATGGATTACTCTGCAACAACACCCCTGCATCTGTTAAGGCCAGTGATCGGAATAGTGAAAGGTCTACTTCTGCAGACTCTGTCTCTACAAATTTAACCCAAGGTGTGGATCTCATCCAAGATTCACAACCAGCAAGATCCAATGAAATATCTGTTCCAAGGGGTACAGGTTCTACTAGAAATGCTAAGGAATTTAAGCTCAATCCAGCTGCCAAAACCTTCTCTCCATCTTTTGTGAATCCCATGCCAGCAACTTCGGCTGCAAACATGGTATACATACCAAATAGCTCTCCTCCAGTACCTGTTACTATTCAACCTGAAGTTGGATTCAATACTTTTGCTTCTCGGCCATCAATGCCTGTTAAGGTTTCACAGTATAGTAATTTGACGGTGGGAAATGGTGGCAGTGGCTCTCAATTTTCGCAACCTATTGTTGGACATGTGGCGCATAGAGCCCAACCTCTACGATATGCTACACATTACAATCCTGTTTTGTCTGAACCTGCTTATATGCAACCAAGCTCTCCTGCTGTTATGGTTGGACGTTCCCCCCAGTTAGTCTATGTTCAGCCAGTTTCCCATGATTTGATTCATGGAACGACGGCTGTCCCACCAGTCTCAGCTCGCCCTCTGATGAATCATGTACAATTTCCAAAGCAGCAGGGAGGAACAATTGGTCCAGCAATGCCGGTTTGTGTGCCCCCTCCTGTCTTAACAAGTGGACATCAGCCCTTCACACTTCGAAGCCACATTCCTCTTCTGCAACCTGGCTTTCCTGTCTCTCGACCTATTTCCGTCCCAGGACCAAATGGTTTCTATGGCACCAAGTTTTAG 1473 0.4515 MGCRNRDSITENHTSSSSSSSDSLSEALLFTTMCIVGHPVDVHVKDGSVYSGIFHTASVHADYGIVLKKARMTKKGKGNNNVGNEGFVDTLVILSSDLVQVVAKGVMLHADVVGGNITGGDEEAVAHNVCSESLTCEVENHTGPLMDTKQVNHSRQAGDDKSNSNGKTDNCGEKSEFVNEKTDEKIQSLNSSHESQEVAVEHGSTDRTSIPSDNGLLCNNTPASVKASDRNSERSTSADSVSTNLTQGVDLIQDSQPARSNEISVPRGTGSTRNAKEFKLNPAAKTFSPSFVNPMPATSAANMVYIPNSSPPVPVTIQPEVGFNTFASRPSMPVKVSQYSNLTVGNGGSGSQFSQPIVGHVAHRAQPLRYATHYNPVLSEPAYMQPSSPAVMVGRSPQLVYVQPVSHDLIHGTTAVPPVSARPLMNHVQFPKQQGGTIGPAMPVCVPPPVLTSGHQPFTLRSHIPLLQPGFPVSRPISVPGPNGFYGTKF 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00873 490 PANTHER POLYADENYLATE-BINDING PROTEIN INTERACTING PROTEIN 1 487 - -
Gma18g00873 490 Pfam Ataxin 2 SM domain 26 104 IPR025852 -
Gma18g00873 490 MobiDBLite consensus disorder prediction 142 275 - -
Gma18g00873 490 MobiDBLite consensus disorder prediction 7 22 - -
Gma18g00873 490 MobiDBLite consensus disorder prediction 173 190 - -
Gma18g00873 490 MobiDBLite consensus disorder prediction 1 22 - -
Gma18g00873 490 PANTHER ATAXIN 2-RELATED 1 487 IPR045117 GO:0003723
Gma18g00873 490 MobiDBLite consensus disorder prediction 191 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00873 Gma-Chr18 10115545 10135799 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00873 - - gmx:100809285 962.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00873 18 10115545 10135799 Gma18g00873 18 10115545 10135799 ECH
Gma18g00873 18 10115545 10135799 Gma08g02957 08 46066259 46074169 GST