Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00799 ATGACTTCTCCGCTGGTGGCGGAGGGCGCCGCCGTCACGGCGTTCCGATCGGTGATGCTCCGGGTGCAGCAGGCGGCGGAGAGATCCGGGTCCAAACCCGACCGGGTCCGGGTCGTGGCGGTTTCCAAGACGAAACCCGTCACTCTGATTCAACAACTCTACGACGCCGGTCACCGACACTTCGGCGAAAACTACGTCCAAGAAATCATTGAAAAAGCTCCTCAGCTTCCCCCAGACGTTGAGTGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGGGTGGAGTTCCAAATCTGGCCATGGTTGAGAGTGTGGACAATCAGAAGATAGCAAATAATCTTGACCGTATGGTATCAACCCTTGGAAGAAATCCTCTGAAGGTTTTGGTGCAAGTAAATACAAGTGGAGAAGAATCCAAATCTGGTATTGATCCTTCCGATTGTGTTGAGCTTGCAAAACATGTGAAATTGAGCTGCCCAAACCTAGTGTTCTCTGGCCTAATGACGATAGGAATGCCAGACTATACCTCAACTCCACAGAACTTTCAGACACTATCAAATTGCAGAACTGAAGTATGCAAGGCACTTGAAATGCCCGAGGAGGAATGTGAACTGTCAATGGGCATGTCTGGTGATTTTGAGTTAGCGATTGAAATGGGTAGTACCAATGTAAGAATTGGATCCACAATATTTGGACCGAGGGAGTATGCAAAGAAACAGTAA 735 0.4816 MTSPLVAEGAAVTAFRSVMLRVQQAAERSGSKPDRVRVVAVSKTKPVTLIQQLYDAGHRHFGENYVQEIIEKAPQLPPDVEWHFIGHLQSNKVKTLLGGVPNLAMVESVDNQKIANNLDRMVSTLGRNPLKVLVQVNTSGEESKSGIDPSDCVELAKHVKLSCPNLVFSGLMTIGMPDYTSTPQNFQTLSNCRTEVCKALEMPEEECELSMGMSGDFELAIEMGSTNVRIGSTIFGPREYAKKQ 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00799 244 CDD PLPDE_III_YBL036c_euk 16 236 - -
Gma18g00799 244 TIGRFAM TIGR00044: pyridoxal phosphate enzyme, YggS family 21 238 IPR011078 GO:0030170
Gma18g00799 244 Hamap Pyridoxal phosphate homeostasis protein. 13 237 IPR011078 GO:0030170
Gma18g00799 244 ProSitePatterns Uncharacterized protein family UPF0001 signature. 82 96 IPR011078 GO:0030170
Gma18g00799 244 SUPERFAMILY PLP-binding barrel 13 236 IPR029066 -
Gma18g00799 244 Pfam Alanine racemase, N-terminal domain 23 238 IPR001608 -
Gma18g00799 244 PANTHER PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN 7 243 IPR011078 GO:0030170
Gma18g00799 244 Gene3D Alanine racemase 7 244 IPR029066 -
Gma18g00799 244 PANTHER PYRIDOXAL PHOSPHATE HOMEOSTASIS PROTEIN 7 243 - -
Gma18g00799 244 PIRSF YBL036c_PLPDEIII 3 244 IPR011078 GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00799 Gma-Chr18 8974942 8978688 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00799 K06997 - gmx:121174069 486.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00799 18 8974942 8978688 Gma18g00799 18 8974942 8978688 ECH
Gma18g00799 18 8974942 8978688 Gma08g02990 08 46469663 46473749 GST