Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00780 ATGGAACTTGACATAGTACCATTTGATTCATGTTCCAAAGAGTACCAAAATCTTTATGAAGAGTGGTTCAATTATGCAGATGCAGATGGGGATGGTCGTTTTACGGGAAATGAAGCCATCAAATTCTTTGCCATGTCAAACTTATCTCGACAAGAACTTAAGCAGGTATGGGCCATTGCAGATTCAAAACGAGAAGGATATCTTGGTTTCAAAGAATTTGTCATTGCTATGCAGCTTGTTTCTTTAGGACAATGTGGATACTCAATAACACACGATTTGCTAACTAGTGATGCTATGAGACATGCAAAACCACCCACAATGGATGGTTTGGATGTATTGCTTACAAAGAAAAAACGTAAACAAAAAGATAAAGAATTGATTAGTCCTCCTCACCCATCACCGACAAGTAAATGGTTTACTGCAAAGTCAGCAAAAAAGGTTCCTGCTTCCTCAGTGACATCAATTGTCGATGGTTTAAAAAGACTTTACCTTCAAAAGTTAAAGCCCTTAGAAGTTACTTACCACTATAATGATTTCGTATCTCCTCTCTTGACAAATAGTGACTTTGATGCCAAACCTATGGTTTTGCTTTTGGGTCAATACTCAACTGGGAAAACAACATTTATTAAGCATATGCTTAAAAGCAGAGCTCATATTGGACCAGAGCCAACAACGGATAGGTTTGTTGTTGTCATGTCTGGACCTGATGAAAGAAGCATTCCTGGCAATACTATTGCTGTCCAAGCAGACATGCCATTTAGTGGTCTTACAACTTTTGGTACATCATTTTTGTCCAAATTTGAGTGTTCTCAAATGCCTCATCCTCTATTGGAGCACATTACATTTGTTGACAGCCCTGGAGTTTTATCTGGAGAAAAGCAAAGAACACATAGACAATATGATTTTACAGGTGTAACATCTTGGTTTGCTGCTAAATGCGATTTAATACTTCTTCTATTTGATCCTCACAAACTTGATGTTAGTGATGAGTTCAAGCGTGTGATATCATCCCTACGGGGACATGATGACAAAATTCGAGTTGTCTTGAACAAAGCAGACCAAGTTGATACCCAACAACTAATGAGAATATACGGTGCATTAATGTGGTCACTTGGGAAGGTGTTGAATGTTCCTGAAGTCATGCGGGTATATATTGGCTCTTTCAATGACAAGACTATAAATGATTCTCTTAGTGGTCCACTTGGAAATGAACTCTTTCAAAAAGAACAAGATGACCTTCTTTCAGATTTGAAAGATATACCAAAAAAGGCCTGTGATCGTAAAATCAATGAGTTTGTAAAACGAGCACGAGCTGCTAAGATACATGCTTATATTATTAGTCATCTTAAGAAGCAGATGCCTGCTATGATAGGCAAAGCTAAAGCTCAGCAAAAGCTCATTGATAATTTGGATACTGAATTTGTTAAGATACAAAAGGAGTTCCATCTACCACCTGGTGACTTTCCAAATGTTGAACATTTCAAAGAGACCTTGAGTGGTTACAACATTGACAAGTTTGAGAAATTGAACAAAAAAATGATACAAACAGTGGATGACATGCTTGCTTATGATGTTCCTAACCTCTTGAAGACATTCAGAAATCCCTATGGCTAA 1614 0.3748 MELDIVPFDSCSKEYQNLYEEWFNYADADGDGRFTGNEAIKFFAMSNLSRQELKQVWAIADSKREGYLGFKEFVIAMQLVSLGQCGYSITHDLLTSDAMRHAKPPTMDGLDVLLTKKKRKQKDKELISPPHPSPTSKWFTAKSAKKVPASSVTSIVDGLKRLYLQKLKPLEVTYHYNDFVSPLLTNSDFDAKPMVLLLGQYSTGKTTFIKHMLKSRAHIGPEPTTDRFVVVMSGPDERSIPGNTIAVQADMPFSGLTTFGTSFLSKFECSQMPHPLLEHITFVDSPGVLSGEKQRTHRQYDFTGVTSWFAAKCDLILLLFDPHKLDVSDEFKRVISSLRGHDDKIRVVLNKADQVDTQQLMRIYGALMWSLGKVLNVPEVMRVYIGSFNDKTINDSLSGPLGNELFQKEQDDLLSDLKDIPKKACDRKINEFVKRARAAKIHAYIISHLKKQMPAMIGKAKAQQKLIDNLDTEFVKIQKEFHLPPGDFPNVEHFKETLSGYNIDKFEKLNKKMIQTVDDMLAYDVPNLLKTFRNPYG 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00780 537 Gene3D - 159 528 - -
Gma18g00780 537 CDD EHD 194 435 - -
Gma18g00780 537 SUPERFAMILY EF-hand 12 94 IPR011992 -
Gma18g00780 537 PANTHER EH DOMAIN 19 535 - -
Gma18g00780 537 Gene3D - 195 420 IPR027417 -
Gma18g00780 537 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 189 422 IPR030381 GO:0005525
Gma18g00780 537 CDD EH 19 84 IPR000261 GO:0005515
Gma18g00780 537 Gene3D - 11 108 - -
Gma18g00780 537 Pfam N-terminal EH-domain containing protein 158 190 IPR031692 -
Gma18g00780 537 PANTHER CALCIUM-BINDING EF HAND PROTEIN 19 535 - -
Gma18g00780 537 Pfam Dynamin family 195 351 IPR045063 -
Gma18g00780 537 SMART efh_1 18 46 IPR002048 GO:0005509
Gma18g00780 537 SMART efh_1 52 80 IPR002048 GO:0005509
Gma18g00780 537 ProSiteProfiles EH domain profile. 15 93 IPR000261 GO:0005515
Gma18g00780 537 Pfam Cytoskeletal-regulatory complex EF hand 28 80 IPR000261 GO:0005515
Gma18g00780 537 Pfam Domain of unknown function (DUF5600) 427 528 IPR040990 -
Gma18g00780 537 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 459 IPR027417 -
Gma18g00780 537 ProSiteProfiles EF-hand calcium-binding domain profile. 48 83 IPR002048 GO:0005509
Gma18g00780 537 SMART eh_3 8 103 IPR000261 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00780 Gma-Chr18 8695605 8706726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00780 1 536 EF-hand Containing Proteins AT3G20290 78.309 0.0 867
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00780 K12483 - gmx:100816958 1067.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00780 18 8695605 8706726 Gma18g00780 18 8695605 8706726 ECH