Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00778 ATGTTTGCTTACAGGGTTTTGTCCCGTTCCTCTGCCATCCTTTCTCGAAGCTTCACCCTTTTCTCTGTTTCACGAAATTCCCAACCTTTCTCCACCACCCTGTCCAATAACTTCCATTCCCTCCTTCACCCATCTCCCAACAAGCTGATTCCGGTTCAAACCAATTTTCTGAATTCATCATTGACTTCGAGATTCGGGTTTTCTTCAACGGCCTCGCATGAGCATGCAAGTGAAGAAGCAAAGGTATCTGATCAGTCTGAACAAGCTGAAGCTGCGGATCAAACCAAAGAATCAGATGTAGAGAGTGAATGTGATCTGTCCAGGGATGATTTGATAAAGCTTGTTGCTGAGAAGGAACAACTTTTGAAGTTGAAGCACAAGGAGATTGAGAAAATGCAGGATAAAGTTCTGCGAACTTATGCAGAGATGGAGAATGTCATGGATAGGACAAGACGTGAAGCAGAGAATTCGAAAAAATTTGCTATACAGAATTTTGCAAAGAGTTTACTAGACGTTGCTGATAATTTGGGAAGAGCTTCCTCAGTTGTAAAGGACAGCTTTTCAAAAATTGAATCTCCTGAGGAGTCTTCTGAAGCAGCACAACTCCTGAAAACACTTCTAGAAGGTGTTGAAATGACAGAGAAACAACTTGCAGAGGTACTCAAAAAGTTTGGTGTGGAAAAATTTGATCCTACAAATGAGCCATTTGATCCACACATGCACAATGCCATCTTCCAAATCCCTGATGCTTCGAAGGCCCCTGGCACTGTTGGAGTTGTTCTGAAGGCAGGATATAAGCTCTATGATCGTGTTCTTCGTCCGGCAGAAGTTGGTGTAACTCAAGAAGTGGAGGATAACAAAGCAGCTGAGTGA 873 0.4284 MFAYRVLSRSSAILSRSFTLFSVSRNSQPFSTTLSNNFHSLLHPSPNKLIPVQTNFLNSSLTSRFGFSSTASHEHASEEAKVSDQSEQAEAADQTKESDVESECDLSRDDLIKLVAEKEQLLKLKHKEIEKMQDKVLRTYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKIESPEESSEAAQLLKTLLEGVEMTEKQLAEVLKKFGVEKFDPTNEPFDPHMHNAIFQIPDASKAPGTVGVVLKAGYKLYDRVLRPAEVGVTQEVEDNKAAE 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00778 290 CDD GrpE 130 279 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Gma18g00778 290 PANTHER GRPE PROTEIN 11 283 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Gma18g00778 290 Gene3D - 113 224 IPR013805 -
Gma18g00778 290 SUPERFAMILY Coiled-coil domain of nucleotide exchange factor GrpE 117 225 IPR013805 -
Gma18g00778 290 Gene3D Head domain of nucleotide exchange factor GrpE 225 280 IPR009012 GO:0006457
Gma18g00778 290 ProSitePatterns grpE protein signature. 236 279 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Gma18g00778 290 Coils Coil 115 135 - -
Gma18g00778 290 Pfam GrpE 103 280 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Gma18g00778 290 PANTHER GRPE PROTEIN HOMOLOG 11 283 - -
Gma18g00778 290 SUPERFAMILY Head domain of nucleotide exchange factor GrpE 226 281 IPR009012 GO:0006457
Gma18g00778 290 MobiDBLite consensus disorder prediction 73 103 - -
Gma18g00778 290 Hamap Protein GrpE [grpE]. 77 281 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Gma18g00778 290 MobiDBLite consensus disorder prediction 74 103 - -
Gma18g00778 290 PRINTS GrpE protein signature 137 153 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Gma18g00778 290 PRINTS GrpE protein signature 233 248 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Gma18g00778 290 PRINTS GrpE protein signature 260 279 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00778 Gma-Chr18 8667890 8671228 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00778 K03687 - gmx:100812682 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00778 18 8667890 8671228 Gma18g00778 18 8667890 8671228 ECH