Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00347 ATGGAGGAACCAAACCCGTGTATATTCAACCCTGCAATTTTGGATTCTCTCACTGATGATGCGGTGCAAGAAATCCTCGACGGCTACAATGGCTTCTGCAACGCTACGCAATCACTTCTCGTCGGTAACGGCGATCTCTCCGTCGCTCCCGACTTTGTTTCTCTTGTTCACGTTCTCTGCAAACACCGCCTCCGTTCCCTCGTTCAAGACCACTTTTTTCGACTCCTAGAGGAGACGTTTGAACGAAATGGGGCATCGAGATTTTGGCGCCATTTTGATCCTTATTCTCGTGTTGCAGGTTTGAACAAGAATGATGACCTTGATATTGATGAGGATGAGATTCAGAGTGTGTTGTATAAAGCTTTGGAAGATATTACTTTGGAGAAACAATATCAGGAGAAGTGTCTATTGATGTTGGTGCATGCTTTGCAATCTTACAAGGACCAGGTGTCAGAGGATAAGCATGGTTTTGAAGGAGACAGAAATTACCTTACCTCTAAGTATCAATGGATTGTCTCTTCTGTACTCATGGCCTCACTTCCTCGGCATTTCCCTGTTATACTGCATTGGTATTTTAAAAGAAAACTGGAGGAGTTGAGTACCATTATGGATGGAGAGTTCGGTGATGATGCATCTCAAAATAAGGATTGCATGGATTTAGATGAAAAAGGAAAACTATGCAACAAAGTTGGTGAAATGGATGTTGATGAGTGCTATAATGACCATAGGTTCTCGGAAAACTGTAAACTTGTGAAGAACATTGGAAAAGTTGTTCTTGATCTTAGGAATCTTGGATTTACTTCCACGGCTGAAGATGCTTATGCTTCTGCTATATTTTTACTACTGAAGGCAAAAGTACATGATGTAGCTGGTGATGATTTTCGGAGTTCTGTTTTACAATCTATCAAAAGCTGGATACAGGCTGTTCCTCTTCAGTTTCTTCATGCGCTTCTTGTCTATCTTGGTGATGTCGTTAGTTATGAGAGTACTTCATCAGGTCTGAAATCACCTTTGGCACCACAGCCATCTTCATGCTGTCCTGGAATTGATACTCCCTCTGAAGGGCTTGTGAGATGGAAGTTGCGGCTGGAATATTTTGCATATGAAACACTACAAGATTTAAGAATAGCCAAATTATTCGAGATAATTGTTGATTATCCTGAGAGCTCTCCTGCAATTGAAGACTTAAAATTGTGTCTTGAATACACTGGACAACATTCAAAGCTGGTGGAATCATTTATTTCAGCACTGCGTTATCGCTTGCTTACTGCAGGCGCCTCAACCAATGATATATTACACCAATATGTTTCAACTATCAAAGCACTTAGGACAATAGACCCTGCAGGTGTTTTCCTTGAGGCAGTTGGTGAACCCATAAGAGATTATTTAAGAGGAAGGAGAGATACCATAAAGTGCATAGTAACCATGATGACAGATGGGACTGGTGCACATTCAAGTTCATCTGGAAATCCTGGAGATAGCCTTCTCGAAGAGTTGAACAGAGATGAAGAGATTCAAGAGAATGCTGGTGTTGATGATGATTTTAACACTGATGATAGGCAAGCATGGATCAATGCCATGCGCAGATGGCAACCTGACCCTGTGGAAGCAGATCCATTAAAGGGAAGCAGAAACCAAAGGAAGGTTGACATCCTTGGGATGATTGTTGGCATAATTGGTTCAAAAGATCAATTAGTTCATGAATATCGAACTATGCTTGCCGAGAAACTTCTAAATAAATCAAATTATGATATTGATTCAGAGATACGTACTTTAGAACTCCTCAAGATACACTTTGGAGAGAGCAGCCTACAGAAATGTGAGATTATGCTCAATGATCTAATTGGCTCAAAGAGAATCAACAGTAACATTAAAGCTACCATAAATCAGCCATCTCAGACCAGTGTTGAATTGGGAGACAGTGCAATATCCATGGATGTAATTTCTGCTACTATCATATCTTCTAATTTCTGGCCTCCAATACAGGATGAGCCCCTTAACCTGCCTGAGCCTGTTGACCAGCTCCTATCTGATTATGCAAAGAGATTTAATGAAATCAAAACACCACGTAAGCTGCTGTGGAAAAAAAGTCTTGGAACCATCAAGCTGGAGTTGCAGTTTCAAGATAGGGAAATGCAATTCACAGTAGCACCTGTTCATGCATCTATCATTATGAAATTTCAAGATCAACCAAGTTGGACCTCTAAAAAGCTTGCAGCTGCTATTGGGGTACCTGCAGATGTTTTAAATCGGAGAATAAATTTCTGGATAAGCAAGGGAATCATTGCAGAGTCACAAGGGGCAGATTCCTCTGACCATGTATACACCATTGTGGAAAACATGGCTGAGCCAAGTAAGAATGGAGCCAGTACTGGTTGTGCTCAGGAACTTCTAGGAGGTGAAGAGGAGGAAGAGAGATCTGTGGCATCTGTGGAAAATCAACTTCGTAAGGAAATGACTGTATATGAGAAATTTATCCTGGGGATGCTCACAAACTTTGGTAGCATGGCATTAGATCGAATTCACAATACTCTCAAGATGTTTTGCATTGCCGATCCCCCATATGACAAGTCACTCCAGCAACTACAAAGCTTTTTATCTGGTCTAGTTTCTGAGGAGAAGTTAGAACTTCGGGATGGAATGTACTTTCTAAAGAAGTAG 2661 0.4107 MEEPNPCIFNPAILDSLTDDAVQEILDGYNGFCNATQSLLVGNGDLSVAPDFVSLVHVLCKHRLRSLVQDHFFRLLEETFERNGASRFWRHFDPYSRVAGLNKNDDLDIDEDEIQSVLYKALEDITLEKQYQEKCLLMLVHALQSYKDQVSEDKHGFEGDRNYLTSKYQWIVSSVLMASLPRHFPVILHWYFKRKLEELSTIMDGEFGDDASQNKDCMDLDEKGKLCNKVGEMDVDECYNDHRFSENCKLVKNIGKVVLDLRNLGFTSTAEDAYASAIFLLLKAKVHDVAGDDFRSSVLQSIKSWIQAVPLQFLHALLVYLGDVVSYESTSSGLKSPLAPQPSSCCPGIDTPSEGLVRWKLRLEYFAYETLQDLRIAKLFEIIVDYPESSPAIEDLKLCLEYTGQHSKLVESFISALRYRLLTAGASTNDILHQYVSTIKALRTIDPAGVFLEAVGEPIRDYLRGRRDTIKCIVTMMTDGTGAHSSSSGNPGDSLLEELNRDEEIQENAGVDDDFNTDDRQAWINAMRRWQPDPVEADPLKGSRNQRKVDILGMIVGIIGSKDQLVHEYRTMLAEKLLNKSNYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLIGSKRINSNIKATINQPSQTSVELGDSAISMDVISATIISSNFWPPIQDEPLNLPEPVDQLLSDYAKRFNEIKTPRKLLWKKSLGTIKLELQFQDREMQFTVAPVHASIIMKFQDQPSWTSKKLAAAIGVPADVLNRRINFWISKGIIAESQGADSSDHVYTIVENMAEPSKNGASTGCAQELLGGEEEEERSVASVENQLRKEMTVYEKFILGMLTNFGSMALDRIHNTLKMFCIADPPYDKSLQQLQSFLSGLVSEEKLELRDGMYFLKK 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00347 886 Pfam Cullin family 548 754 IPR001373 GO:0006511|GO:0031625
Gma18g00347 886 Pfam Anaphase promoting complex (APC) subunit 2 825 882 IPR014786 -
Gma18g00347 886 Gene3D Cullin; Chain C, Domain 2 645 787 - -
Gma18g00347 886 SMART cul_2 550 707 IPR016158 -
Gma18g00347 886 Gene3D Cullin Repeats 526 631 - -
Gma18g00347 886 ProSiteProfiles Cullin family profile. 554 757 IPR016158 -
Gma18g00347 886 PANTHER BNAC04G32030D PROTEIN 14 886 - -
Gma18g00347 886 SUPERFAMILY Cullin homology domain 529 781 IPR036317 -
Gma18g00347 886 Gene3D - 801 886 IPR036388 -
Gma18g00347 886 SUPERFAMILY "Winged helix" DNA-binding domain 815 885 IPR036390 -
Gma18g00347 886 SMART APC2_2 825 884 IPR014786 -
Gma18g00347 886 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 2 14 886 IPR044554 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00347 Gma-Chr18 2910247 2917128 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00347 K03349 - gmx:100805741 1736.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00347 18 2910247 2917128 Gma11g02230 11 37639120 37646885 GST