Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00340 ATGGAAGTATTGTGTTCATTTCCTCTGTTGAAGGTCAGACAAGCTTATGCTGCAACTAAAGCTGCCATCGATCAGCTTACCAAATATCTTGCTTGTGAATGGGCAAAAGACAATATAAGGAGCAACAGTGTTGCACCTTGGTATACCCTAACATCACTTGAGGAACCTTTGCTTGCAAACAAACAGCTTGTTAATGAGATAACATCTCAAACGCCGATAAAGCGGATGGCAGAAACGCATGAAGTTTCATCCTTGGTGACTTTCCTTTGTCTGCCAGCAGCATCCTACATCACTGGACAGATTGTTTCTGTTGATGGAGGATTCACTGCTAATGGATTTCAACCCAGCATGAGAATTTCTTAA 363 0.4187 MEVLCSFPLLKVRQAYAATKAAIDQLTKYLACEWAKDNIRSNSVAPWYTLTSLEEPLLANKQLVNEITSQTPIKRMAETHEVSSLVTFLCLPAASYITGQIVSVDGGFTANGFQPSMRIS 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00340 120 PRINTS Glucose/ribitol dehydrogenase family signature 16 35 IPR002347 -
Gma18g00340 120 PRINTS Glucose/ribitol dehydrogenase family signature 37 54 IPR002347 -
Gma18g00340 120 PRINTS Glucose/ribitol dehydrogenase family signature 72 92 IPR002347 -
Gma18g00340 120 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 14 111 IPR036291 -
Gma18g00340 120 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 14 116 - -
Gma18g00340 120 Gene3D - 5 115 - -
Gma18g00340 120 Pfam Enoyl-(Acyl carrier protein) reductase 13 109 - -
Gma18g00340 120 PANTHER TROPINONE REDUCTASE 14 116 IPR045000 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00340 Gma-Chr18 2848139 2849476 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00340 10 115 Miscellaneous Gene Families AT2G29290 53.704 3.64e-37 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00340 K08081 - gmx:100819646 198.749