Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00329 ATGAGTACACATAGTACGTTGGATATTGTTGTAAATGATATACTTCGAGTGGTCACACCAGTACAAGAAGATTGGGAGATACGATTTGCAATTATTAATGATTTACGAAGTATTGTTGAATCTGTAGAAAGCCTGAGAGGAGCAACTGTTGAGCCATTTGGATCATTTGTATCTAATCTCTTCACGCGATGGGGTGACTTGGATATTTCAATTGAGCTATCAAATGGTTTGCATATTTCATCTGCTGGGAAAAAACAAAAACAAACTTTCTTGGGGGATGTTTTAAAAGCTTTGAGAATGAAAGGTGGAGGGAGCAACTTGCAGTTCATCTCCAATGCACGAGTGCCCATTTTAAAATTTAAAAGCTACCGGCAGGGTGTATCTTGTGACATTTCAATTAATAACCTGCCTGGTCAAATGAAATCCAAGATTTTGCTTTGGATCAACAAGATAGATGGCCGTTTTCGTCATATGGTTTTACTGGTCAAGGAATGGGCCAAAGCACATAAAATCAATAACTCGAAAGCTGGAACTTTCAACTCCTATTCACTAAGTTTGCTTGTGATATTTTATTTTCAGACATGTATTCCTGCAATTTTTCCACCGCTTAAAGATATATACCCTGGCAACATGGTTGATGATCTTATAGGCGTTAGATCTGATGCAGAGAATCTTATTGCACAAACATGTGATGCTAACATAAACCGGTTCATATCAAACAGGGCAAGGTCAATTAACAGAAAATCTGTGGCTGAGCTTTTTGTTGAATTCATAGGAAAGTTTGCTAAGATGGATTCAATGGCCGTGAAGATGGGAATTTGCCCCTATTCTGGAAAATGGGAACAAATAGAGGACAATATGATTTGGTTACCCAAGACTTATGCAATATTTGTTGAGGATCCTTTTGAGCAGCCACAAAATACTGCAAGATCCGTTAGCGCAGGACAACTGAAGAAGATAACTGAGGCATTTGCAAGGACGCATGACTTGCTTACCTCAACAAATCAGAATCAAATTTCACTTTTGTCCAACATGGCACCTGCGCATGTTATAAGATGTATCACAAGGCCTTATGGTGGAGGTTACTTTCACCCAACTCAGCCACAAGTGCAGAGGGCCATACGCCCACAACTGCAGTCGCAACGTCATTTTCAAAATAGGCCAACAGATATGGAGGCCAAAGAGTTAAAAGGGGATCTCTATTACTCCGAAAATGCCATGGTTTTAGCTTTGAACAGGTGA 1242 0.3961 MSTHSTLDIVVNDILRVVTPVQEDWEIRFAIINDLRSIVESVESLRGATVEPFGSFVSNLFTRWGDLDISIELSNGLHISSAGKKQKQTFLGDVLKALRMKGGGSNLQFISNARVPILKFKSYRQGVSCDISINNLPGQMKSKILLWINKIDGRFRHMVLLVKEWAKAHKINNSKAGTFNSYSLSLLVIFYFQTCIPAIFPPLKDIYPGNMVDDLIGVRSDAENLIAQTCDANINRFISNRARSINRKSVAELFVEFIGKFAKMDSMAVKMGICPYSGKWEQIEDNMIWLPKTYAIFVEDPFEQPQNTARSVSAGQLKKITEAFARTHDLLTSTNQNQISLLSNMAPAHVIRCITRPYGGGYFHPTQPQVQRAIRPQLQSQRHFQNRPTDMEAKELKGDLYYSENAMVLALNR 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00329 413 Gene3D Beta Polymerase, domain 2 31 151 IPR043519 -
Gma18g00329 413 Gene3D - 152 328 - -
Gma18g00329 413 Pfam Nucleotidyltransferase domain 36 135 IPR002934 GO:0016779
Gma18g00329 413 SUPERFAMILY Nucleotidyltransferase 6 147 IPR043519 -
Gma18g00329 413 CDD NT_PAP_TUTase 27 148 - -
Gma18g00329 413 PANTHER PROTEIN HESO1 1 394 - -
Gma18g00329 413 PANTHER POLY A POLYMERASE CID PAP -RELATED 1 394 - -
Gma18g00329 413 SUPERFAMILY PAP/OAS1 substrate-binding domain 154 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00329 Gma-Chr18 2742975 2748128 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00329 - - gmx:100800950 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00329 18 2742975 2748128 Gma18g00329 18 2742975 2748128 ECH
Gma18g00329 18 2742975 2748128 Gma11g02251 11 37832890 37839986 GST