Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00269 ATGTTACCTCAAAAGCAAGCTGAAGAAGCCATGATGTCAAGCCTCACCCAAACGATGGAGCGTGAGGAGGGAGAGGAAGTGAAAGGGGAGACCTCACAGTTTAGCTTTAAAAATGCTCTCTGGCATGGTGGTTCTGCCTATGATGCTTGGTTCAGCTGTGCCTCAAATCAGGTTGCTCAGGTTCTGTTGACTCTGCCTTACTCATTCTCTCAGCTGGGAATGCTTTCAGGCATCATATTCCAAGTGTTCTATGGCTTGCTTGGGAGTTATACTGCTTATTTAATTAGCATTCTGTACATTGAGTACAGAAGCCGGAAAGAGAAAGAGAATGTCAGCTTCAAAAACCATGTCATCCAGTGGTTTGAAGTGTTGGAAGGCTTGCTGGGTCCATACTGGAAAGCTATTGGATTGGCCTTCAACTGCACTTTTCTCCTCTTTGGATCTGTCATCCAGCTCATAGCTTGTGCAAGTAATATATACTACATTAATGATCACTTGGACAAGAGGACTTGGACCTACATATTTGGAGCTTGCTGTGCCACCACAGTGTTCATTCCATCATTCCACAACTACAGGATATGGTCCTTCCTTGGTCTTGGCATGACCACCTACACTGCATGGTATTTGACCATTGCAGCCCTTGTTCATGGCCAGGTTGAAAATGTGACGCATTCGGCCCCAAATAAGATGGTTTTGTATTTCACAGGCGCCACCAACATACTCTACACTTTCGGCGGGCACGCCGTCACAGTGGAAATCATGCATGCAATGTGGAAGCCTCAGAAGTTCAAATATATATATCTTTATGCAACAGTTTATGTGTTCACCCTCACTCTACCATCTGCTATTGCCGTTTACTGGGCCTTTGGTGACCAACTTTTGGATCATTCCAATGCCTTCTCGCTCCTCCCTCGCTCTGGCTGGCGTGACACCGGTGTCATCCTAATGCTCATTCACCAGTTCATCACATTTGGGTTTGCTTGTACGCCATTGTATTTCGTGTGGGAGAAAGTGATAGGAATGCATGACACAAAGAGCATATTTTTGAGGGCAATAGCGAGGTTACCTGTGGTGATACCAATATGGTTTTTGGCCATTATTTTCCCTTTCTTTGGGCCCATTAATTCAGCTGTGGGGGCCCTTTTGGTCAGCTTCACCGTTTACATTATCCCTGCTTCTGCTCATATGCTCACATACAGATCTGCCTCAGCAAGAAAGAATGCCGCGGAGAAATTGCCCTTCTTTATCCCTAACTGGACGGTGATGTACGTGGTGAATGCATTTGTGGTGGTGTGGGTTCTGGTGGTGGGCTTTGGGTTTGGAGGGTGGGCCAGCATGACAAATTTCATTAAGCAGGTTGACACATTCGGGCTATTTGCCAAGTGCTACCAATGCCCGCCCAAAGTTCTGCCCTCCTCCAACCACACCTTGCATCACTGA 1440 0.4653 MLPQKQAEEAMMSSLTQTMEREEGEEVKGETSQFSFKNALWHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIIFQVFYGLLGSYTAYLISILYIEYRSRKEKENVSFKNHVIQWFEVLEGLLGPYWKAIGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAALVHGQVENVTHSAPNKMVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLYATVYVFTLTLPSAIAVYWAFGDQLLDHSNAFSLLPRSGWRDTGVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSIFLRAIARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPASAHMLTYRSASARKNAAEKLPFFIPNWTVMYVVNAFVVVWVLVVGFGFGGWASMTNFIKQVDTFGLFAKCYQCPPKVLPSSNHTLHH 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00269 479 PANTHER OS05G0424000 PROTEIN-RELATED 2 468 - -
Gma18g00269 479 Coils Coil 5 25 - -
Gma18g00269 479 Pfam Transmembrane amino acid transporter protein 42 435 IPR013057 -
Gma18g00269 479 PANTHER AUXIN INFLUX TRANSPORTER 2 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00269 Gma-Chr18 2222239 2226930 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00269 4 465 Organic Solute Cotransporters AT2G21050 76.190 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00269 K13946 - gmx:100795466 951.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00269 18 2222239 2226930 Gma11g02304 11 38445775 38450088 ECH
Gma18g00269 18 2222239 2226930 Gma18g00269 18 2222239 2226930 ECH
Gma18g00269 18 2222239 2226930 Gma11g02304 11 38445775 38450088 GST
Gma18g00269 18 2222239 2226930 Gma14g00515 14 4918117 4923061 PCT
Gma18g00269 18 2222239 2226930 Gma02g02414 02 50215908 50220298 PCT
Gma14g00515 14 4918117 4923061 Gma18g00269 18 2222239 2226930 PCT
Gma02g02414 02 50215908 50220298 Gma18g00269 18 2222239 2226930 PCT