Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00261 ATGAGAATCACGTTGGAGCCGAGCCCAAGCCGCTCCCAAACTCCCAAAGAAGAACTCCAGTGGGTCCCACTTCCCAAACACCCTCTCTTCACCGCTCACGGCGGTGCCACCACCGCCGCCGATTCCCGGAACCTCCTTGCCTGGGACGGAGCCTCGCGCCTCTACTTATGGGACTCAAACAACCGCTGCCTCCACCGCCTCTCTCTCCGTCTCGGCGACCCCGATCCCTCTTCCGTCCTCGCCGCTTCTCCCTCTAAGGTGTTGCAAGCGGACGCGGTGCTTGATTTCGATGTCCGCAAAATCTCAATCAACAGGAACAGAACAGCGATACTCCTTTTCGGTTCCGAGACACTCTCTGTTATGTACCTCTACGGACGCACCTCTAAGAAGGACGTGAACTTGATTTGCAGGACTATTACTGTTGGTTCTCAGATGTATTCCACCGGTGGCAATGATATTCGTGTGCTACAAGCATTATGGCACCCTTACAGTGATACTCATTTGGGAATCCTTTCTTCTGACTCCGTTTTCCGACTTTTCAACTTTGCCGTGGATCCTTTGCAACCTGAGCAAGAATATTATTTACAGCCTGTTGAGCCTGGTAGATCTAGAAATGCCTCATCATTGTGTCCAGTTGATTTTTCTTTTGGGGGAGACCACTTATGGGACCTGTTCAGTGTAAGTTTTTATTTTGTTTATGGGGCTTTCTATGTACTTTGCCCAGTTGTTCCATTTGGAGGTCTCTTCAAATGTGAGTCTTTGGTAGAAATATTCAATGATGCTCACACATTTGGAATAATATCAATCAACTCTGTTGCGGCAAGTAATTCAAAGTTGGCCATCTCCTGGTTAGAAGCAGCTTTTCCCGAGTATACATATATTTTAAACTGGACTTTTGTCAGCTGTATTATCAATAGATGGAAAAGTGGACCTCTGCGAAGAGTAGGTCAGGGTGGGAATGAAGATTCAGTTGGTCGTAGTGCAGAATGTGAAGGTCGTGCAGTTAGTTTTCTCTACAATTTAGTCAGCAAAGACTCTATTTTGGTGACTGCCTGGAGTGGGGGGAAATTACAGATTGATGCTCTAGCCGATGAGATCCAACCTGTCTGGAGTGTTGGTAGTCCACCTCGTCTTCGTGTTGATTCCCATGACCAAATTCTTGGCCTTGCTATGATTTGTGAGTCAATTGCCAGCAGCAGTTTGTGGAAGCTTGATCATAATGCCTGGTTGGGTAATTCACCCCCTTTGCTGAGACTGGCTATTGTTGATTTGGCTCTGCCACAAAGAGCAGAAAGTGGTTATATTATTTCATTGTTCATTGATACACTTATGCCAGAAAGAATATATTCCCTTCATGACGGAAGGATTGACTCAATAGTTTTACATTTTCTTCCATTTACAAGTCAGACAAATGGCAAGGATGATACAATGAAAACACCATCTGTGCACCCTGTTCTAAATACTTGCCAGAGTGGATTCACCTCAGAACTGTCACTTTGTGGCTTTGTGTCATTATCAGATTCATTTGGATATTCATGGATTGTAGCTATTACTCTTTCTCTAGAGTGTGTTGTGCTTGAGATGAAAAGCTGGAACCTCTTGCTTCCAGTAAGCATTGATATGGAGAAGAAAACCATTTCATCAGAGGGGGAACCAAAAGAGAGAGATATGCCAACAATAATTAGCAAGGAACTACTTAGAGGGACCAGGGAGGTACTTGTTCCTCAGGCCTCTCCAAGTTTACAATCTGTTGCAGCTGATTCAATTGAAGGTCGATCAACATTGCATCAGTATTTCAAGCTGTTTCATGAAACCTATGTGGAGTATGCACATAAGGTGTACCTGGAGCTCAAGCATCACGCACCTCAGTTGAAGAAAATCATTAATGACCAACATTCTCGATTAGAGCGCTTGCAACATTTAAGGAACTTACCTTATGCTCACAAAAAACCACTGTCCAGAGCAGAGCGGCAGTTTAAATCTGAGCTTGACCATTTTAAGGAAGTTGAGTTGGATGCTTTGCATTCTTCTGTTGATGCGCTAAGTGCAAGGCTGAGAAGGCACTTGCAAGCTTCAAAAGCTAATCACCAACAACAGAAAACACCAGGGAAGAAAAGTTGTGCAGGAGATGATCAGATGTCCATGCTCAAATCATCGCTTGAAAAACTTTCACTTGTAAATACTGAAAATTCAAAGAAAGTTAAACTTGTGGAGTCTACATTGAGAAACAAAGAAAGAAGCAGCAGAGAATCAAGCCTGCCTATTCTCTAA 2271 0.4408 MRITLEPSPSRSQTPKEELQWVPLPKHPLFTAHGGATTAADSRNLLAWDGASRLYLWDSNNRCLHRLSLRLGDPDPSSVLAASPSKVLQADAVLDFDVRKISINRNRTAILLFGSETLSVMYLYGRTSKKDVNLICRTITVGSQMYSTGGNDIRVLQALWHPYSDTHLGILSSDSVFRLFNFAVDPLQPEQEYYLQPVEPGRSRNASSLCPVDFSFGGDHLWDLFSVSFYFVYGAFYVLCPVVPFGGLFKCESLVEIFNDAHTFGIISINSVAASNSKLAISWLEAAFPEYTYILNWTFVSCIINRWKSGPLRRVGQGGNEDSVGRSAECEGRAVSFLYNLVSKDSILVTAWSGGKLQIDALADEIQPVWSVGSPPRLRVDSHDQILGLAMICESIASSSLWKLDHNAWLGNSPPLLRLAIVDLALPQRAESGYIISLFIDTLMPERIYSLHDGRIDSIVLHFLPFTSQTNGKDDTMKTPSVHPVLNTCQSGFTSELSLCGFVSLSDSFGYSWIVAITLSLECVVLEMKSWNLLLPVSIDMEKKTISSEGEPKERDMPTIISKELLRGTREVLVPQASPSLQSVAADSIEGRSTLHQYFKLFHETYVEYAHKVYLELKHHAPQLKKIINDQHSRLERLQHLRNLPYAHKKPLSRAERQFKSELDHFKEVELDALHSSVDALSARLRRHLQASKANHQQQKTPGKKSCAGDDQMSMLKSSLEKLSLVNTENSKKVKLVESTLRNKERSSRESSLPIL 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00261 756 Pfam Nuclear pore component 36 217 IPR019321 -
Gma18g00261 756 MobiDBLite consensus disorder prediction 690 713 - -
Gma18g00261 756 PANTHER NUCLEOPORIN NUP84-RELATED 636 746 IPR037700 GO:0000055|GO:0000056|GO:0006913|GO:0017056
Gma18g00261 756 PANTHER NUCLEOPORIN NUP84-RELATED 11 639 IPR037700 GO:0000055|GO:0000056|GO:0006913|GO:0017056
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00261 Gma-Chr18 2149486 2154447 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00261 K14318 - gmx:100801853 1313.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00261 18 2149486 2154447 Gma18g00261 18 2149486 2154447 ECH
Gma18g00261 18 2149486 2154447 Gma11g02310 11 38512010 38517408 GST